Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

 Score = 73.9 bits (180), Expect = 3e-17
 Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 27/233 (11%)

Query: 179 LNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGG 238
           L++ MSHL L                V LF+  GA++E  G     I+   S+LGH+RGG
Sbjct: 253 LDEGMSHLILLA--------------VPLFIFLGALIEMTGMARAMIQFLASLLGHVRGG 298

Query: 239 PAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPP 298
            +   + A  L   +SGS IA++        P M +    G K G +    S  G  T  
Sbjct: 299 LSYVLIGAMYLVSGISGSKIADMAAIAPVLFPEMTK---RGAKPGDLVALLSATGAQTET 355

Query: 299 IMGAAAFLMVEYV-GISYVEVIKAAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTV 357
           I  +   + +  V G+S   +    +LPA++   AL  +V     +  +SG+ R  +  +
Sbjct: 356 IPPSIVLITIGSVTGVSIAALFTGGLLPAVVLGAALCAVVWWRYRREDLSGVQRYSKREI 415

Query: 358 AQKLLSFTATILGLCVISAVVYYGIGWTKEAFGDAATPILTV-VLLAAYVGLV 409
            + LL     +L   VI A V  G+          AT + T+ ++ AA VGLV
Sbjct: 416 GKLLLVALPAVLLPFVIRAAVVEGVA--------TATEVSTIGIVYAAVVGLV 460