Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 51.6 bits (122), Expect = 9e-11
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 10/201 (4%)

Query: 207 LFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGT 266
           LFV  G +L++       ++    + G + GG A + V+   L    +G   A+VV  G 
Sbjct: 62  LFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGL 121

Query: 267 FTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAAILPA 326
            ++P+M +  +    A     A+ T GQ+ PP       L+ + +G+   ++ +AA+ P 
Sbjct: 122 ISLPVMLKYRYDKGLACGTICASGTLGQIIPP--SIVLILLGDVLGVPVGDLFQAALWPG 179

Query: 327 LI---SYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISAV---VYY 380
           L+   +YI  I I      +A M   P    S   + + +  A I  L +I  V   ++ 
Sbjct: 180 LMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFA 239

Query: 381 GIGWTKE--AFGDAATPILTV 399
           G+    E  A G A   +L +
Sbjct: 240 GVATPTESAALGGAGAILLAL 260



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 37/263 (14%)

Query: 399 VVLLAAYVGLVKISA---PYAKEGLGIDENLQYVPDVAPTLKSGLHYLLPIVVLVWCLTV 455
           ++L+AAY+  + I A   P A   +  D +L    +V   LK+ +  L  IVV++  +  
Sbjct: 180 LMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFA 239

Query: 456 ERFSPGLSAFWASVFMIFILLTQRPLMALFNRTGSLGDAAKEGV--TDLLESLVSGARNM 513
              +P  SA       I + L              + DA+KE V  T ++ +++ GA   
Sbjct: 240 GVATPTESAALGGAGAILLALAYGQFS-----WSMVYDASKETVKVTAMVFAILLGA--- 291

Query: 514 IGIGVATAAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLIFTAVISLILGMGLPTTA 573
                A + A T  G     G  LV    +     G+    LI T ++ LILG  +    
Sbjct: 292 ----TAFSMAFTYTG-----GDELVEEWMMNL--PGDKWGFLIVTMLVILILGFFIDFVE 340

Query: 574 NYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSD 633
              ++  ++APV V +  +      LIA++L   +       TPP G + F    +A   
Sbjct: 341 ICFIIVPILAPVAVLMDVDMTWFAILIAMNLQTSFL------TPPFGFSLFYLKGVAPKS 394

Query: 634 PIRTGIQGFAYDIRTAILPFMFV 656
                      DI   ++PF+ +
Sbjct: 395 VT-------TMDIYRGVVPFILI 410