Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 76.6 bits (187), Expect = 3e-18
 Identities = 65/220 (29%), Positives = 99/220 (45%), Gaps = 12/220 (5%)

Query: 189 TTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASG 248
           T++ +F        S + LFVL G ++ RAG        A + +GH +GG A A+V+ASG
Sbjct: 46  TSQVIFETGFAYVLSVIPLFVLMGNLVARAGMARELYAGANAFVGHRKGGLAMASVIASG 105

Query: 249 LSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMV 308
             G + GSSIA   T      P MKR G+  T A     A  T G L PP     + +MV
Sbjct: 106 GFGCICGSSIATAATMTRVAYPEMKRHGYKDTLATGSIAAGGTLGILIPP-----STIMV 160

Query: 309 EYVGISYVEVIK---AAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLS-- 363
            Y  ++  ++ K   A +LP L++   L   V     +  ++G P   + T  ++L +  
Sbjct: 161 IYGIMTETDIGKLFIAGVLPGLVAIACLCAAVVYITWRDPLAG-PPGERFTWTERLAAVR 219

Query: 364 -FTATILGLCVISAVVYYGIGWTKEAFGDAATPILTVVLL 402
              A +L   ++   +Y G     E  G  A+      LL
Sbjct: 220 GIWAVVLLFALVIGGIYGGFFTATEGAGVGASGAFLFALL 259