Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., permease component of C4 dicarboxylate transporter from Agrobacterium fabrum C58

 Score = 63.9 bits (154), Expect = 2e-14
 Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 9/216 (4%)

Query: 193 VFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGL 252
           +FG     +   +  F   G +LE++G     +     + G +RGG A A +    +   
Sbjct: 48  IFGQMSNETLLAIPFFTFMGLILEKSGMAEDLLDTIGQLFGPVRGGIAFAVIFVGAILAA 107

Query: 253 VSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVG 312
            +G   A+V++ G  ++P+M R G+    A     A+ T  Q+ PP +     ++ + +G
Sbjct: 108 TTGVVAASVISMGLISLPIMLRYGYDRKIAAGTIAASGTLAQIIPPSL--VLIVLADQLG 165

Query: 313 ISYVEVIKAAILPA--LISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLL-----SFT 365
            S  ++ K A++P   L+    L  +V      A +  LP   ++    KLL     S  
Sbjct: 166 RSVGDMYKGALIPGLMLVGAYTLYIVVTSIISPAKVPALPSEARTLRGSKLLLKVITSLV 225

Query: 366 ATILGLCVISAVVYYGIGWTKEAFGDAATPILTVVL 401
             ++ + ++   ++ GI    E     A   L + L
Sbjct: 226 PPLVLIFLVLGTIFLGIATPTEGGAMGAVGALALAL 261



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 25/126 (19%)

Query: 521 AAAGTVVGVVTLTGIGLVMTDFVEFISG--------------GNLMLMLIFTAVISLILG 566
           AA+GT+  ++  + + +V+ D +    G              G   L ++ T++IS    
Sbjct: 142 AASGTLAQIIPPSLVLIVLADQLGRSVGDMYKGALIPGLMLVGAYTLYIVVTSIISPAKV 201

Query: 567 MGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFV--FYFGILADDTPPVGLAAF 624
             LP+ A  +  S L+  VI +      L+ PL+ + L +   + GI    TP  G A  
Sbjct: 202 PALPSEARTLRGSKLLLKVITS------LVPPLVLIFLVLGTIFLGIA---TPTEGGAMG 252

Query: 625 AAAAIA 630
           A  A+A
Sbjct: 253 AVGALA 258