Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., TRAP dicarboxylate transporter subunit DctM from Agrobacterium fabrum C58

 Score = 67.4 bits (163), Expect = 2e-15
 Identities = 61/276 (22%), Positives = 125/276 (45%), Gaps = 32/276 (11%)

Query: 149 PPLMMVAAL-FLLYTFAGPYMPDVIAHKGASLNKAMSHLWLTTEG------------VFG 195
           PPLM +  + F+LY F        +A   A++      + + TE             +FG
Sbjct: 8   PPLMFLGMIIFMLYGFP-------VAFSLATVGLVFGVIGIFTEHFSPAFLQALPLRIFG 60

Query: 196 VALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSG 255
           +        +  F   GA+LER G     ++    + G + GG A A ++   + G ++G
Sbjct: 61  IISNDLLLAIPFFTFMGAILERCGLAEDLLEGTGKLFGAIPGGLAYAVIIVGAILGAITG 120

Query: 256 SSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISY 315
           +  A+V+T G  ++P+M + G+    A  V  A+ T  Q+ PP +     ++ + +G S 
Sbjct: 121 TVAASVITMGVISLPIMLKYGYNPRLATGVIAASGTITQVIPPSL--VLIVLADQLGKSV 178

Query: 316 VEVIKAAILPALISY-IALIYIVHLEACK-AGMSGLP-----RRHQSTVAQKLLSFTATI 368
            ++   AI P+++   I +++I+ +   +   +  LP       +++ V + L     +I
Sbjct: 179 GDMYLGAIGPSILQVTIFMLFILLMSIVRPKDLPALPPEARGELNRALVFRVLAGMIPSI 238

Query: 369 LGLCVISAVVYYGIGWTKEAFGDAATPILTVVLLAA 404
           + + ++   ++ G+    EA    A  ++  ++LAA
Sbjct: 239 VLIFLVLGTIFLGLATPTEA---GALGVVGAMVLAA 271