Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 63.9 bits (154), Expect = 3e-14
 Identities = 84/342 (24%), Positives = 145/342 (42%), Gaps = 19/342 (5%)

Query: 83  AMKGSPRDRIPLTDWLLA--LAGSFSAAYIYLFYAELA-GRSGAPTQFDVIASVVGMVLL 139
           AM G     + L +W+    L    +  ++YL     + G++ A      IA V  + L 
Sbjct: 126 AMLGGTSPTLGLPEWVRFGFLGAGGALIFVYLTLQRFSEGKTFAVLLSMTIALVAYVGLP 185

Query: 140 LEATRRALGPPLMMVAALFLLYTFAGPYMPDVIA--HKGASLNKAMSHLWLTTEGVFGVA 197
                  L P L +     +    A P     +A  +   +    +    + +  V G++
Sbjct: 186 QIFVDTTLPPSLFLALTAAVGLVLAAPLAHAFLAAAYVAIAFGSTLPEPAIVSSTVTGMS 245

Query: 198 LGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSS 257
             +  +  F F+L G++L  +G     ++ A S++GH R G A+  ++ S L    SGSS
Sbjct: 246 KFLLLAIPF-FLLAGSLLTISGVANQLVRFAASVVGHRRAGLAQTTLLTSVLFSGASGSS 304

Query: 258 IANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVE 317
           +AN     +   P + + G+P  +AGA+  A S    + PP    A  ++     +S   
Sbjct: 305 VANAAFGASTFQPELVKHGYPPAQAGAIIAATSVLDNVIPP--SIAFLILATATNLSVGS 362

Query: 318 VIKAAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATI--LGLCVIS 375
           ++        +  + L   +HL      +  LPR   +T A++  S  A I   GL VI 
Sbjct: 363 LLVGGFFAGGLMAVCLGVAIHLSV--RSVDTLPR---ATGAERWRSAIAAIPAFGLGVIV 417

Query: 376 AV-VYYGIGWTKEAFGDAATPILTVVLLAAY-VGLVKISAPY 415
            V +  GI  T EA   AA  + T++L   Y +G+ +I A +
Sbjct: 418 VVGIRIGIVTTTEAAALAA--LYTLLLGFGYRLGVGRIFATF 457