Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 72.0 bits (175), Expect = 7e-17
 Identities = 50/175 (28%), Positives = 82/175 (46%)

Query: 208 FVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGTF 267
           F+  G ++ R G     I+ A  ++GH+RGG  +  +VAS L G +SGS++A+    G  
Sbjct: 61  FIFAGDLMVRGGIAHRLIRFAAGLVGHLRGGLGQVNIVASTLFGGISGSAVADASAVGGL 120

Query: 268 TIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAAILPAL 327
            IP M + G+    A  V V A+    + PP      + +     +S  ++  A I+P L
Sbjct: 121 MIPQMAKRGYDKDYAVNVTVNAAIIALMIPPSHNMILYSIAAGGNVSVADLFTAGIIPGL 180

Query: 328 ISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISAVVYYGI 382
           +   AL+   ++ A + G    P    S +   LL+    IL + +I   V  GI
Sbjct: 181 LLAAALMVTAYIVARRKGYPSEPFPGFSKLMYYLLASFPGILLIGIIFGGVRSGI 235



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 7/127 (5%)

Query: 503 LESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLIFTAVIS 562
           +E+++   R    + +    A +   ++    +  +M   +  IS   ++++L+   VI 
Sbjct: 266 VEAVMGAVRTTAMVLLVIGTAASFGWLMAFLQVQTLMIAAISAISDNPIIVLLVIN-VIL 324

Query: 563 LILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDTPPVGLA 622
           L+LG  +      I+ + ++ PV+   G     I P+    + +   GI   +TPPVG  
Sbjct: 325 LLLGTFMDMAPMVIISTPVLLPVVKAFG-----IDPVHFGVVMILNAGI-GLNTPPVGTV 378

Query: 623 AFAAAAI 629
            F   A+
Sbjct: 379 LFVGCAV 385