Pairwise Alignments

Query, 145 a.a., universal stress protein from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., universal stress protein UspA from Pseudomonas simiae WCS417

 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 38/150 (25%), Positives = 78/150 (52%), Gaps = 15/150 (10%)

Query: 5   ILVPVDLNE-----QGFADKAVQLAVWHAKHSNAEIHLLNV----LPGIHMSMVATYFPK 55
           ILV +DL+      QG  ++ ++LA   A    A +HLL++    + G   + V+T    
Sbjct: 153 ILVAIDLSHLEELTQGVNEQVLELASTLAASCGARLHLLSISNWSVVGDTSTSVSTLSLN 212

Query: 56  DAAAQMKNDVRAQ-LKAFAEKHIAEEVVYKLHIAEGKPYATILDYAERLGADLIVM-PSH 113
           ++     ND + +  +  A ++  +   ++ H+  G P+A I  +A++   D++V+  SH
Sbjct: 213 ESLRDAVNDAQEEAFEVLASRYGIDG--HRRHLLTGIPHAVIERFAQQNEFDIVVLGASH 270

Query: 114 KRSRIDKVMLGSVASKVVENSPINVMVVKP 143
            R     + +GS A +++ + P +++VV+P
Sbjct: 271 ARG--GDMFIGSTAERLLNHPPCSLLVVQP 298



 Score = 25.8 bits (55), Expect = 6e-04
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 17/116 (14%)

Query: 5   ILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAA----- 59
           ++VP ++      D+A  LA      + A +H++     +    VA  F  +A       
Sbjct: 9   LIVPTEMTRTPAFDRAQALAC----ATGASLHMV-AFDYVQALAVAGLFDHEAMTRAREG 63

Query: 60  --QMKNDVRAQLKAFAEKHIAEEVVYKLHIAEGKPYATILDYAERLGADLIVMPSH 113
             Q+      Q   FA   +  EVV+    A+  P   +LDY     ADL+V   H
Sbjct: 64  YLQVHRHWLEQQARFAGGQVTSEVVW----AKASP-GHVLDYVNDFHADLVVKDIH 114