Pairwise Alignments

Query, 1291 a.a., DUF3971 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1271 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  218 bits (554), Expect = 4e-60
 Identities = 284/1305 (21%), Positives = 506/1305 (38%), Gaps = 118/1305 (9%)

Query: 19   LLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPSLSLQTLQ 78
            LL++ A+ V+  R L P +  ++AEI+        + + I  V+G W    P L    + 
Sbjct: 22   LLVLAAVYVSLGRELTPLVAEYRAEIEAKAQAAVDMPLHIGSVEGRWSGFAPVLRAHDVM 81

Query: 79   AHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLALEQNPNPK 138
                 S    L    VE+  D+  SL  R+  +A L V GL L  +        ++ + K
Sbjct: 82   VGEGSS---ALRLDQVEVVPDMWASLMAREVRIAHLQVGGLQLSAK--------EDKDGK 130

Query: 139  QSRQGRVVKQ-----LDDLL--LRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 191
             + QG  V+       + LL  +++++  +L +S +  + F      L    L       
Sbjct: 131  WALQGLPVQDDQPVDPEQLLKNMQKVERVSLLDSQVTLQPFDQAPVTLTYVGLSLHTGVT 190

Query: 192  RHFAEGVVSIAGININSLLVSANF-IDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTG 250
            R   +  +++   +   L VS    I     +D     Y+S  +     W+   L  Q  
Sbjct: 191  RQRLDARLTLP--DGQPLAVSLRTRIRASQWKDGEVQAYLSLPQSDWAKWIPAKLTQQWK 248

Query: 251  IQKGQVSLNAWAT------------LEHNQPKDGYVEFKPSELVWQNGEQTHELLLESGI 298
            + + +     W T            L   Q K  Y + KP  +          L L +  
Sbjct: 249  LTQFKAGGEFWLTWAQGTVQSAVVRLNSPQVKGSYADRKPVHI--------ENLALTA-- 298

Query: 299  VELKPTEKGWQVNAHSLRLRSDDELWPLL-----DVAMDWQPDEWRLNLSQLNIENLLPL 353
              L+ +E G +V   SL +   D  W         +A D   + W+L   +L++  + PL
Sbjct: 299  -YLQRSETGLKVLFDSLAMNLGDTRWESRLQLQQRLATDKDLEVWKLQADRLDLTPITPL 357

Query: 354  AKLI---PE--SQTLNHWLTTLKPKGTLEDVRIAKGATLESLRYSASLIDGGIAQWELLP 408
               +   PE  ++T+ H   T   +  L D R  +  T + + ++A+L   G   +   P
Sbjct: 358  LNALAPLPEGFAKTIQHLKATGLLRNVLVDFR-PEDTTDQKVSFAANLERIGFDAYMGAP 416

Query: 409  QVNALQAQIQGSPSKALIKASMVDDVLPYGEVFQAPLNIRQGAVNLVWQQEQYGWSLWSD 468
                +   I G      ++    D  L    +F  P    Q    L W+ ++ G++L + 
Sbjct: 417  AARNVSGSISGDLGHGELRMDSKDFSLHLDPIFAKPWQYIQANARLTWKLDKEGFTLIAP 476

Query: 469  KVTVATPDLQALGAF--RLDFPDDASPFLSFYAEADLFNAGETWRYLPTLALGRELTDYL 526
             + V   +      F  RL F      ++         +   T +YLP + L   L ++L
Sbjct: 477  YIKVLGEEGNVAADFLIRLHFDHSQEDYMDLRVGMVDGDGRFTPKYLPAV-LSPALDEWL 535

Query: 527  STAIQAGQVNTAKLIWYGAL--DQFPYRMHNGVFQAWVGLKEAKFAFDTAWPPITDLQLD 584
             TAI  G V+     + G+L  D  P   +  +F     + +A+ AF   WP ++ +  +
Sbjct: 536  RTAILKGAVDQGFFQYQGSLNHDALPASRNISLF---FKVHDAELAFQPGWPHVSKVSGE 592

Query: 585  LLFENDAMYLDSRSATLMEVSAERITGRIPELAEL--GHIEIEAVASAQQGNAIRNYMMA 642
            +  E   + + +    L++   + +   IP   E    H+ +    +   G+ ++    A
Sbjct: 593  VFVEESGVRILASKGQLLDTKVKDVYVNIPHAPEGKDSHLLLTGGFAGGLGDGLKILQEA 652

Query: 643  TPLVDSVGAALTTIQVKGP--VRSEFQLNIPFHSGAEPRAWGFAELSNNAVDIDTPPMSL 700
                  +G A T    KG   ++    L+IP   G EP+     +   + + +  P + L
Sbjct: 653  P-----IGTASTFAGWKGDGDLQGSLDLDIPLAKGTEPKIVVDFKTDKSRLQLAEPTLDL 707

Query: 701  TSVSGKIEFDNDR-VSAAGLDARLLKQPVSIDFKGEDAKRGYAVGIDMVGDWEVKPLIPF 759
            T + G   FD+ + +S   + A+   +P++     +      +  +   G   VK L  +
Sbjct: 708  TQLKGDFRFDSAKGLSGQNITAQAFDRPITAQIVADGKPGNISTRVTAKGQVTVKRLTDW 767

Query: 760  VGERWLSRVKGHAPWQASVDIQLNDVGFTYQLDGKADLRGLESRYPFPLKKALKVKGQAL 819
            +       V G  P+Q    +QL   G   QL   ++L+G+    P P           +
Sbjct: 768  LNISQPLPVSGDVPYQ----LQLTLDGADSQLMVSSNLKGVAVDLPAPF---------GM 814

Query: 820  LQASGNQEMVSARLQLPQAKYQAEI----DLTPKVPVLKATN----LVLGQGSFKISPVV 871
              + G   +    LQ  + +Y  +     + T   P  K  +    L LG G   +    
Sbjct: 815  PASQGRDSVFRMTLQGAERRYWFDYGELANFTFAAPPDKFNDGRGELFLGDGDAVLPGAK 874

Query: 872  GHHVQLRSQAFNLDDWLSILNEKPA--PKSRKSKLASLNTPAFPMPERVDAAVKELTFAG 929
            G  ++      ++D W  +++      P     +L S            D  V +LT  G
Sbjct: 875  GLRIRGVLSELDIDPWKKLVDRYAGNDPGGSAKQLLS----------GADFKVGKLTGFG 924

Query: 930  LDWHDVDLNARRKDLGWLLNLDSQEIKGQANYIEPYDLSIALERLHLFLPQLEAGEEALL 989
              +  V+L   RK   W L LDSQ+ KG  N  +     IA+   ++ LP ++   +A  
Sbjct: 925  TQFDQVNLQLDRKPAAWGLQLDSQQAKGTVNLPDAKGAPIAINLQYVKLPAVDPTVQA-- 982

Query: 990  VDLDRQKLPLITDFDRKFHQWMPNLTLTIKDFWLQGYKIGQANVDFQRQGDTLLWKSIDF 1049
               D      + D D K    +P L + I   +     IG  ++  +     + + ++D 
Sbjct: 983  ---DENAPDPLADVDPKN---IPALDIAIDQLFQGPDLIGTWSLKIRPTAKGMAFNNLDL 1036

Query: 1050 TSGTNQLHVNGTWTLTDTQSRTQMNLDMKGDNNSDLMARFGINSGIQRAPFEITASTQWD 1109
                 QL   G W  T   S +     + G N  D++  +G    +    F +    +W 
Sbjct: 1037 GLKGMQLKGAGGWEGTAGDSSSWYKGRLDGKNIGDVLKGWGYAPTVTSQDFHLDVDGRWP 1096

Query: 1110 GAPWSMQVNTLQGKVDTKLGKGVISDVSGAA---RLLGLFSLDSIIRKMQLDFSDVFDKG 1166
            G+P  +      G +D     G   +V G A   R+ GL + +SI R+++LDFSD+  KG
Sbjct: 1097 GSPAYVGPKRFSGSLDASFRNGQFVEVEGGAQALRVFGLLNFNSIGRRLRLDFSDLLGKG 1156

Query: 1167 MAFDSISGSGELSQGIFVTNN-IKMDAVAGEMTIKGLADLNTRTVDAEVNFVPDITSGIP 1225
            +++D + G    S G+FVT   I M   +  + + G  DL    VDA++     +T+ +P
Sbjct: 1157 LSYDRVKGLLAASNGVFVTREPITMTGPSTNLELNGTLDLVADRVDAKLLVTLPVTNNLP 1216

Query: 1226 VLTAFAVTPQTALYVLAITTVISPVVEVFTQVNYEVKGPLDSPTV 1270
            +       P     +  I  +I   V  F  V Y+V+GP   P +
Sbjct: 1217 IAALIVGAPAIGGALFLIDKLIGDRVARFASVQYKVEGPWKDPKI 1261