Pairwise Alignments

Query, 1291 a.a., DUF3971 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1267 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score =  215 bits (548), Expect = 2e-59
 Identities = 275/1317 (20%), Positives = 515/1317 (39%), Gaps = 109/1317 (8%)

Query: 1    MISTVTRLGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIAD 60
            +++T+TR G   + L   LL++LAL V+  R L P +  ++AE++        + V I  
Sbjct: 7    ILATLTRWG---LGLCALLLVLLALYVSLGRELAPLVAEYRAEVETRAGDALGMPVHIGS 63

Query: 61   VQGYWRNTHPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLV 120
            ++G W    P LS   +      +N + L+   V    DL  SL  RQ  +A L + GL 
Sbjct: 64   LEGGWSALAPILSAHDVTVG-DGANALHLD--QVRAVPDLWGSLLARQVRIAHLELGGLK 120

Query: 121  LDLR-------AIDWLAL--EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRT 171
            + L+       A++ L +  +Q  +P+Q  +   +     +L  Q+    L+ S +   T
Sbjct: 121  VSLKEGADGQWALEGLPVKDDQPLDPQQLLERMQMISRLSILDSQVTLQPLEQSPLTL-T 179

Query: 172  FAGDLRQLDIEKLRWQNQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVS 231
            + G    L     R +        +G      +N+ + + ++++      ++   + Y+S
Sbjct: 180  YVG--LSLKTGATRQRLDARLTLPDG--QPVALNLRTRIRASDW------KNGQAEAYLS 229

Query: 232  ADKVRVLPWLTRYLKDQTGIQKGQVSLNAWATLEHNQPKDGYVEFKPSELVWQNGE---- 287
              +     WL + L  Q    + +     W +      +   V     +L     E    
Sbjct: 230  LPQSDWSKWLPKGLTRQWHFSQIKAGGELWLSWGAGTLQSAAVRLNAPQLTGAYAERKPV 289

Query: 288  QTHELLLESGIVELKPTEKGWQVNAHSLRLRSDDELWPLL-----DVAMDWQPDEWRLNL 342
            Q   L L+      +    G+     SL +   +  W          A +   + W L  
Sbjct: 290  QVRNLALDG---YFQRGADGFTATFDSLAMSLGETRWESRLQLQQSAATEKAEELWHLQA 346

Query: 343  SQLNIENLLPLA-KLIPESQTLNHWLTTLKPKGTLEDVRI---AKGATLESLRYSASLID 398
             +L++  L PL   L P  + +   +  LK  G L +V +    + A    + ++ +L  
Sbjct: 347  DRLDLTPLTPLLHSLAPLPEGVATAIDRLKVTGALRNVLLDYRPQNAGDRKVSFATNLDT 406

Query: 399  GGIAQWELLPQVNALQAQIQGSPSKALIKASMVDDVLPYGEVFQAPLNIRQGAVNLVWQQ 458
             G   +   P    +   + G      ++    D VL    +F  P    Q    L W+ 
Sbjct: 407  VGFDAYRGAPAARNVSGSLSGDLGGGELRMDSKDFVLHLDPIFAKPWQYLQANARLTWKL 466

Query: 459  EQYGWSLWSDKVTVATPDLQALGAF--RLDFPDDASPFLSFYAEADLFNAGETWRYLPTL 516
            ++  ++L +  + V   + +  G F  RL        ++         +   T +YLP +
Sbjct: 467  DKQSFTLIAPYLKVLGEEGRIAGDFLIRLHLDHSQEDYMDLRVGLVDGDGRYTAKYLPAV 526

Query: 517  ALGRELTDYLSTAIQAGQVNTAKLIWYGALDQFPYRMHNGVFQAWVGLKEAKFAFDTAWP 576
             L   L ++L TAI  G V+     + G+L+         +   +  + +A+ AF   WP
Sbjct: 527  -LSPALDEWLRTAIVKGAVDQGFFQYQGSLNHGAGDAARSI-SLFFKVHDAELAFQPGWP 584

Query: 577  PITDLQLDLLFENDAMYLDSRSATLMEVSAERITGRIPEL--AELGHIEIEAVASAQQGN 634
             ++ +  D+  E+  + + +    L++   + +T  IP     +  H+ ++   +   G+
Sbjct: 585  SVSKVSGDVFVEDSGVRIYASQGQLLDTQVKDVTVEIPHAPSGQPSHLLLDGGFAGGLGD 644

Query: 635  AIRNYMMATPLVDSVGAALTTI--QVKGPVRSEFQLNIPFHSGAEPRAWGFAELSNNAVD 692
             ++    A      +G A T    + +G ++   +L+IP   G +P+           + 
Sbjct: 645  GLKILQTAP-----IGTAETFAGWEGEGSLQGNVKLDIPLVKGEQPKILVDFNTDKARLK 699

Query: 693  IDTPPMSLTSVSGKIEFDNDR-VSAAGLDARLLKQPVSIDFKGEDAKRGYAVGIDMVGDW 751
            +  P + LT + G + FD+ + +S   + A+   +PV+     E         I   G  
Sbjct: 700  LSEPALELTQLKGDLRFDSSKGLSGKNISAQAFDRPVTAQIFAEGRAGALNTRITASGRV 759

Query: 752  EVKPLIPFVGERWLSRVKGHAPWQASVDIQLNDVGFTYQLDGKADLRGLESRYPFPLKKA 811
            E K L  ++G      V G  P+Q  V +     G   QL   ++L+G+    P P   A
Sbjct: 760  ETKKLTDWLGVTQALPVSGVIPYQLQVILD----GADSQLSVNSNLKGVAVNLPAPFGLA 815

Query: 812  LKVKGQALLQASGNQEMVSARLQLPQAKYQAEI----DLTPKVPVLKATN----LVLGQG 863
              V         G   +    LQ  + +Y  +     + T   P  K       L+LG G
Sbjct: 816  ADV---------GRDTVFRMTLQGAERRYWVDYGDVANFTYAAPSGKVAEGRGELLLGDG 866

Query: 864  SFKISPVVGHHVQLRSQAFNLDDWLSILNEKPAPKSRKSKLASLNTPAFPMPERVDAAVK 923
               +    G  ++      +++ W  ++N+        S    L+          D  V 
Sbjct: 867  DAVLPGAKGIRLRGSLPELDVEPWQELVNKYAGHDPGGSARQLLSG--------ADLKVG 918

Query: 924  ELTFAGLDWHDVDLNARRKDLGWLLNLDSQEIKGQANYIE----PYDLSIALERLHLFLP 979
            +LT  G     V L   RK   W L LDSQ+ KG  +  +    P  + +   RL    P
Sbjct: 919  KLTAMGTTLDQVALQLDRKPDAWALRLDSQQAKGNVSLPDAKAAPIGIKLDYVRLPAADP 978

Query: 980  QLEAGEEAL--LVDLDRQKLPLITDFDRKFHQWMPNLTLTIKDFWLQGYKIGQANVDFQR 1037
             ++A E A   L  +D  ++P               + + I   +     IG  ++  + 
Sbjct: 979  TVQADENAPDPLASVDPTRIPA--------------MDIAIGQLFQGTDLIGAWSLKVRP 1024

Query: 1038 QGDTLLWKSIDFTSGTNQLHVNGTWTLTDTQSRTQMNLDMKGDNNSDLMARFGINSGIQR 1097
                +   ++D       L+ +G W      + +     + G N +D++  +G    +  
Sbjct: 1025 TAKGIALSNLDMGLKGMVLNGSGGWEGAPGATSSWYKGRISGKNLADVLKGWGFAPSVTS 1084

Query: 1098 APFEITASTQWDGAPWSMQVNTLQGKVDTKLGKGVISDVSGAA---RLLGLFSLDSIIRK 1154
              F +    +W G+P  +      G +D  L KG   ++ G+A   R+ GL + +SI R+
Sbjct: 1085 QEFRLDVDGRWPGSPAWVATKRFSGSLDASLSKGQFVEIEGSAQALRVFGLLNFNSIGRR 1144

Query: 1155 MQLDFSDVFDKGMAFDSISGSGELSQGIFVTNN-IKMDAVAGEMTIKGLADLNTRTVDAE 1213
            ++LDFSD+F KG+++D + G    S G++VT   I +   +  + + G  D+    VDA+
Sbjct: 1145 LRLDFSDLFGKGLSYDRVKGLLVASDGVYVTREPITLTGPSSNLELNGTLDMVGDRVDAK 1204

Query: 1214 VNFVPDITSGIPVLTAFAVTPQTALYVLAITTVISPVVEVFTQVNYEVKGPLDSPTV 1270
            +     +T+ +P+       P     +  I  +I   V  F  V Y+VKGP   P +
Sbjct: 1205 LLVTLPVTNNLPIAALIVGAPAVGGALFLIDKLIGDRVARFASVRYDVKGPWKEPKI 1261