Pairwise Alignments

Query, 1291 a.a., DUF3971 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1266 a.a., FIG005080: Possible exported protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  496 bits (1276), Expect = e-144
 Identities = 360/1295 (27%), Positives = 583/1295 (45%), Gaps = 61/1295 (4%)

Query: 5    VTRLGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGY 64
            V RL  IL+    +L+++ AL V+ LR+ LP ++ ++  I + +   + V VA + +   
Sbjct: 1    VRRLPGILLLTGAALIVIAALLVSGLRLALPHLDAWRPAILNKIESVTGVPVAASQLSAS 60

Query: 65   WRNTHPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLR 124
            W+N  P+L    + A   D  ++ +    V +  D+ QSL   +    DLT         
Sbjct: 61   WQNFGPTLEAHNIHAALKDGGELSIKR--VTLALDVWQSLLHMRWQFRDLTF-------- 110

Query: 125  AIDWLALEQNPNPKQSRQGRVVK--QLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIE 182
               W    +   P QS  G  ++  +L DL LRQ D F L++S I + T +G   +L I 
Sbjct: 111  ---WQLNFRTNTPLQSSDGEGIETSRLSDLFLRQFDHFDLRDSQISFLTLSGQRAELAIP 167

Query: 183  KLRWQNQGLRHFAEGVVSIAGININS--LLVSANFIDHGSLRDVSGDFYVSADKVRVLPW 240
            +L W N   RH AEG VS++ +      + V  +  D   L + +G  ++ AD + V PW
Sbjct: 168  QLTWLNGKERHRAEGEVSLSSLTGQHGVMQVRMDLRDDDGLLN-NGRVWLQADDIDVKPW 226

Query: 241  LTRYLKDQTGIQKGQVSLNAWATLEHNQPKDGYVEFKPSELVWQNGEQTHELLLESGIVE 300
            L ++++D   +Q  + SL  W TL   +   G V  K     W     TH L +++   +
Sbjct: 227  LGKWMQDNVALQTARFSLEGWMTLSKGEIAGGDVWLKQGGASWLGDNTTHTLSVDNLTAQ 286

Query: 301  LKPTEKGWQVNAHSLRLRSDDELWPLLDVAMDWQP------------DEWRLNLSQLNIE 348
            +   + GWQ      R+  D + WP   + + W P            DE R+  S L + 
Sbjct: 287  ISREQPGWQFYIPDTRITLDGKPWPSGALTVAWLPQQDVGGENHTRSDELRIRASNLELA 346

Query: 349  NLLPLAKLIPE-SQTLNHWLTTLKPKGTLEDVR--IAKGATLESLRYSASLIDGGIAQWE 405
             L  L  L  + S  L       +P G +  +   I   AT E  R+ AS  +    QW+
Sbjct: 347  GLEALRPLAAKLSPVLGEIWQATQPSGKIATLALDIPLQAT-EKTRFQASWENLAWKQWK 405

Query: 406  LLPQVNALQAQIQGSPSKALIKASMVDDVLPYGEVFQAPLNIRQGAVNLVWQQEQYGWSL 465
            LLP        + GS     +K +M    +PY  VF+APL I  G   L W + + G+ L
Sbjct: 406  LLPGAEHFSGTLAGSVEDGQMKVAMQQAKMPYETVFRAPLEIENGVATLSWLKNENGFQL 465

Query: 466  WSDKVTVATPDLQALGAFRLDFPDDASPFLSFYAEADLFNAGETWRYLPTLALGRELTDY 525
                + V    + A G FR   P    P+L   A     +  + WRY P   +G+ L DY
Sbjct: 466  DGRDIDVKAKAVHARGGFRYLQPTGDEPWLGILAGISTDDGSQAWRYFPENLMGKALVDY 525

Query: 526  LSTAIQAGQVNTAKLIWYGALDQFPYRMHNGVFQAWVGLKEAKFAFDTAWPPITDLQLDL 585
            LS AIQ G+ + A L++ G    FPY+ + G F+  V L+ A FAF   WP + +L ++L
Sbjct: 526  LSGAIQGGEADNATLVYGGNPHLFPYKHNEGQFEVLVPLRNATFAFQPDWPALKNLNIEL 585

Query: 586  LFENDAMYLDSRSATLMEVSAERITGRIPELAELGHIEIEAVASAQQGNAIRNYMMATPL 645
             F ND +++ S S  L  V A ++   IP+ ++   + I+A  +   G A+  Y   TPL
Sbjct: 586  DFLNDGLWMRSDSVDLGGVKASKLAAAIPDYSK-EKLLIDADING-PGKAVGPYFDETPL 643

Query: 646  VDSVGAALTTIQVKGPVRSEFQLNIPFHSGAEPRAWGFAELSNNAVDIDTPPMSLTSVSG 705
             DS+G+ L  +Q+ G V +   L+IP   G +  A G   L NN++ I     +L +++G
Sbjct: 644  KDSLGSTLAELQLDGDVNARLHLDIPL-DGEQVTAEGDVSLRNNSLFIKPLNSTLKNLNG 702

Query: 706  KIEFDNDRVSAAGLDARLLKQPVSIDFKGEDAKRGYAVGIDMVGDWEVKPLIPFVGERWL 765
            K  F N  + +  L A    QP+++DF   +  + Y V +++ G+W+    +  +  +  
Sbjct: 703  KFSFVNGALKSGPLTANWFNQPLNLDFSTTEGAKAYQVAVNLNGNWQ-PTRMGVLPPQLN 761

Query: 766  SRVKGHAPWQASVDIQL-NDVGFTYQLDGKADLRGLESRYPFPLKKALKVKGQALLQASG 824
              + G   W   V I L      TY ++   DLR + S  P PL K         +QA G
Sbjct: 762  DALSGSVTWNGKVGIDLPYHADTTYHIELNGDLRNVSSHLPSPLNKPAGEAIPVNIQADG 821

Query: 825  NQEMVSARLQL-PQAKYQAEIDLTPKVPVLKATNLVLGQGSFKISPVVGHH-VQLRSQAF 882
            N +  +       +  + +   L  K+ + +A   +    S  I P+     V+L   A 
Sbjct: 822  NLKSFALTGSAGSKNHFNSRWLLNQKLTLDRA---IWTTDSRTIPPLPAQQGVELNLPAL 878

Query: 883  NLDDWLSILNEKPAPKSRKSKLASLNTPAFPMPERVDAAVKELTFAGLDWHDVDLNARRK 942
            +   WL++  +  A     S            P+RV      L+  G  W+++ + +   
Sbjct: 879  DGAQWLALFQKGAADNVSSSA---------EFPQRVTLRTPALSLGGQQWNNLSVVSAPS 929

Query: 943  DLGWLLNLDSQEIKGQANYIEPYDLSIALERLHLFLPQLEAGEEALLVDLDRQKLPLITD 1002
              G  +    +E+               ++ L+        G             PL + 
Sbjct: 930  LNGTKIEAQGREVNATLLMRNHAPWLANIKYLY-----YNPGVAKTHASSPTPTSPLASA 984

Query: 1003 FDRKFHQWMPNLTLTIKDFWLQGYKIGQANVDFQRQGDTLLWKSIDFTSGTNQLHVNGTW 1062
                F  W P+L L  ++ WL G K G+ + DF  +G+TL   +    +G  +L  NG W
Sbjct: 985  NTISFRGW-PDLQLRCEECWLWGQKYGRIDGDFAIKGNTLTLANGLIDTGFARLKANGEW 1043

Query: 1063 TLTDTQSRTQMNLDMKGDNNSDLMARFGINSGIQRAPFEITASTQWDGAPWSMQVNTLQG 1122
                   RT +   + G N       FGI++ IQ A F +     W   PW     TL G
Sbjct: 1044 VNAPGNERTSLKGSLHGSNLDTAAGFFGISTPIQNASFNVDYDLHWRNPPWQPDEATLNG 1103

Query: 1123 KVDTKLGKGVISDVSG--AARLLGLFSLDSIIRKMQLDFSDVFDKGMAFDSISGSGELSQ 1180
             + T+LGKG  +D+S   A +LL L S D+++RK++ DF D F +G  FDSI  +  +  
Sbjct: 1104 ILRTRLGKGEFTDLSSGHAGQLLRLLSFDALLRKLRFDFRDTFSEGFYFDSIHSTAWIKD 1163

Query: 1181 GIFVTNNIKMDAVAGEMTIKGLADLNTRTVDAEVNFVPDITSGIPVLTAFAVTPQTALYV 1240
            G+  T++  +D +  ++ +KG  DL  R +D E    P+I++ + V  AFAV P     V
Sbjct: 1164 GVLHTDDTLVDGLEADIAMKGSVDLVRRRLDMEAVVAPEISATVGVAAAFAVNPIVGAAV 1223

Query: 1241 LAITTVISPVVEVFTQVNYEVKGPLDSPTVKELSR 1275
             A + V+ P+    + + Y + GP+D+P + E+ R
Sbjct: 1224 FAASKVLGPLWSKVSILRYRITGPVDAPQINEVLR 1258