Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 1068 a.a., Ribonuclease E (EC 3.1.26.12) from Variovorax sp. SCN45

 Score =  271 bits (693), Expect = 8e-77
 Identities = 163/466 (34%), Positives = 261/466 (56%), Gaps = 12/466 (2%)

Query: 5   LLLNVTPSETR-VAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLD 63
           +L+N T +E R +A+++G  L +  IE E +    GNIYK  V+RV P ++A FVD G D
Sbjct: 4   MLINATQAEERRLAIVDGQKLLDYEIEIEGREQRKGNIYKAVVTRVEPSLEACFVDYGED 63

Query: 64  KAAFLHASDIVPH--TECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLTT 121
           +  FL   +I      E V+ S+ +      I + +R+GQ++ VQV K+  G KGA LTT
Sbjct: 64  RHGFLPFKEISKQYFAEGVSASQAR------IQDAIREGQELTVQVEKEERGNKGAALTT 117

Query: 122 DITLPSRYLVFMPGASHVG-VSQRIESEAERERLKKIVSHYCDEHGGFII-RTAAEGANE 179
            I+L  RY+V MP     G VS+RIE + +R  LK+ +       G  II RTA  G + 
Sbjct: 118 FISLAGRYVVLMPNNPRGGGVSRRIEGD-DRAELKEAMDQLEYPKGMSIIARTAGIGRSA 176

Query: 180 KELTQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEF 239
            EL  D  +L +LWS +       K   ++Y E  L  R +RD+   ++  ILID+   +
Sbjct: 177 PELQWDLNYLLKLWSAIDGAAKGGKGAFLIYQESSLVIRAIRDYFNHDIGDILIDTDDIY 236

Query: 240 ENLKEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEA 299
           +  ++F +  +PE  A+++ Y  D  +F  +  E++I+ +  R V+L SGG ++ID TEA
Sbjct: 237 DQAQQFMAHVMPEHAARVKRYRDDAALFSRFQIEHQIESAYARTVQLPSGGAIVIDHTEA 296

Query: 300 MTTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKR 359
           + ++D+N+   +   ++EET   TN+EA   +ARQ+RLR+LGG+I+IDFIDM   ++R+ 
Sbjct: 297 LVSVDVNSARAIKGGDIEETATRTNLEAADEVARQMRLRDLGGLIVIDFIDMDESKNRRE 356

Query: 360 VLTSLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVET 419
           V + L  AL +DR +      ++ GL+EM+R+R + ++       CP C G G ++  E+
Sbjct: 357 VESRLRDALRQDRARVQFGSISKFGLMEMSRQRLKPALSEGSSIPCPRCGGSGHIRDTES 416

Query: 420 VCFEILREITRVNRAYDADKFVVYASPAVADTLQGEESHALAELEV 465
              +ILR I   +   +     V     VA  L  E+   +A++E+
Sbjct: 417 SALQILRIIQEESMKDNTAAVHVQVPVEVASFLLNEKRPEIAKIEL 462