Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  481 bits (1239), Expect = e-140
 Identities = 245/506 (48%), Positives = 345/506 (68%), Gaps = 32/506 (6%)

Query: 16  VAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLDKAAFLHASDIVP 75
           VA++E G +QE+H+ER  +RG+VGNIY GKVSRVLPGMQ+AF+DIGLD+AAFLH +D++P
Sbjct: 1   VAVVEQGAVQEVHLERTLERGLVGNIYLGKVSRVLPGMQSAFIDIGLDRAAFLHVADLMP 60

Query: 76  HTECVAESEKQQ----------------------------FQVRDISELVRQGQDIVVQV 107
           +      + +++                              V  I   + +GQ ++VQV
Sbjct: 61  NIAAKHAAPRERPVAPSAGEADVAAAGAPPVNAGTKLLAPNPVLPIERQIFEGQALMVQV 120

Query: 108 VKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRI---ESEAERERLKKIVSHYCDE 164
           +KDP+GTKGARLT  I++  R LVF+P  +H+GVSQ+I   + EA R+RL ++ +     
Sbjct: 121 LKDPIGTKGARLTAQISIAGRLLVFLPQDNHIGVSQKIPPAQREALRQRLVRLTATADGS 180

Query: 165 H-GGFIIRTAAEGANEKELTQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDF 223
             GGFI+RT AE A + EL +D A+L++ W ++ E  ++    ++L+ +L L QR+LRD 
Sbjct: 181 SAGGFILRTNAEDATDDELVEDTAYLRKTWLRIKEAATRQPPATLLHEDLNLMQRVLRDL 240

Query: 224 VGTELTKILIDSRQEFENLKEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERK 283
           VG +   I IDSR++   L  F +E++P+  +KL+ Y G++PIFD++  + +I R+L R+
Sbjct: 241 VGADTQSIRIDSREQHGLLMGFAAEFMPDTVSKLQHYSGERPIFDLFSIDEDIARALSRR 300

Query: 284 VELKSGGYLIIDQTEAMTTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGI 343
           V+LKSGGYL+IDQTEA+TT+D+NTG FVG RN ++T+F TN+EA QAIARQLRLRNLGGI
Sbjct: 301 VDLKSGGYLVIDQTEALTTVDVNTGGFVGARNFDDTVFRTNLEAAQAIARQLRLRNLGGI 360

Query: 344 IIIDFIDMASDEHRKRVLTSLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCS 403
           +I+DFIDM  D+HR+ VLT     L +DRVKT   GF+QLGLVEMTRKRTRES+ H+L  
Sbjct: 361 VIVDFIDMVRDDHREAVLTEFRKQLARDRVKTMTGGFSQLGLVEMTRKRTRESLAHMLSE 420

Query: 404 TCPTCEGRGSVKTVETVCFEILREITRVNRAYDADKFVVYASPAVADTLQGEESHALAEL 463
           +C  C GRG+VKT  +VC++ILREI R  RA++  +F V  SP V +    EE   LA L
Sbjct: 421 SCEACSGRGAVKTARSVCYDILREILREARAFNPREFRVVGSPKVIELFLDEERAHLAGL 480

Query: 464 EVFIGKEVRIQAEPLYNQEQFDVVMM 489
             FIGK + +Q+E    QEQ+D+V++
Sbjct: 481 SDFIGKPISLQSESSMTQEQYDIVLL 506