Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 1031 a.a., Ribonuclease E (EC 3.1.26.12) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  274 bits (701), Expect = 9e-78
 Identities = 161/464 (34%), Positives = 259/464 (55%), Gaps = 8/464 (1%)

Query: 5   LLLNVTPSETR-VAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLD 63
           +L+N T +E R +A+++G  L +  IE E +    GNIYK  V+RV P ++A FVD G +
Sbjct: 4   MLINATQAEERRLAIVDGQKLLDYEIEIEGREQRKGNIYKAVVTRVEPSLEACFVDYGEE 63

Query: 64  KAAFLHASDIVPHTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLTTDI 123
           +  FL   +I            Q      I++++++GQ+++VQV K+  G KGA LTT +
Sbjct: 64  RHGFLPFKEISRQYFAAGVPVNQA----RINDVIKEGQELLVQVEKEERGNKGAALTTFV 119

Query: 124 TLPSRYLVFMPGASHVG-VSQRIESEAERERLKKIVSHYCDEHGGFII-RTAAEGANEKE 181
           +L  RY+V MP     G VS+RIE E +R+ LK+ +      +G  II RTA  G +  E
Sbjct: 120 SLAGRYVVLMPNNPRGGGVSRRIEGE-DRQELKQALDQLEYPNGMSIIARTAGIGRDAAE 178

Query: 182 LTQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEFEN 241
           L  D  +L +LW+ +       K   ++Y E  L  R +RD+  +++ +ILID+   FE 
Sbjct: 179 LQWDLNYLLKLWNAIDGATKGGKGAFLIYQESSLVIRAIRDYFNSDIGEILIDTDDIFEQ 238

Query: 242 LKEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAMT 301
             +F S  +PE   +++ Y  D P+F  +  E++I+ +  R V+L SGG ++IDQTEA+ 
Sbjct: 239 AHQFMSHVMPEHGHRVKRYRDDAPLFSRFQIEHQIETAYSRVVQLPSGGAIVIDQTEALV 298

Query: 302 TIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKRVL 361
            +D+N+   +   ++EET   TN+EA   +ARQ RLR+LGG+I+IDFIDM   ++R+ V 
Sbjct: 299 AVDVNSARAIKGGDIEETATRTNLEAADEVARQARLRDLGGLIVIDFIDMEESKNRREVE 358

Query: 362 TSLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVETVC 421
             L  AL +DR +      ++ GL+EM+R+R + ++       CP C G G ++  E+  
Sbjct: 359 NRLRDALRQDRARVQFGSISKFGLLEMSRQRLKPALNEGASIPCPRCGGSGHIRDTESSA 418

Query: 422 FEILREITRVNRAYDADKFVVYASPAVADTLQGEESHALAELEV 465
            +ILR I   +        +V     VA  L  E+   + ++E+
Sbjct: 419 LQILRVIQEESLKDSTAAVLVQVPVEVASFLLNEKRTEITKIEL 462