Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., bundles of cytoplasmic filaments (VIMSS) from Escherichia coli BW25113

 Score =  789 bits (2038), Expect = 0.0
 Identities = 389/489 (79%), Positives = 447/489 (91%)

Query: 1   MSAELLLNVTPSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDI 60
           M+AELL+NVTPSETRVA I+GGILQEIHIEREA+RGIVGNIYKG+VSRVLPGMQAAFVDI
Sbjct: 1   MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI 60

Query: 61  GLDKAAFLHASDIVPHTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLT 120
           GLDKAAFLHASDI+PHTECVA  E++QF VRDISELVRQGQD++VQVVKDPLGTKGARLT
Sbjct: 61  GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT 120

Query: 121 TDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKIVSHYCDEHGGFIIRTAAEGANEK 180
           TDITLPSRYLVFMPGASHVGVSQRIESE+ERERLKK+V+ YCDE GGFIIRTAAEG  E 
Sbjct: 121 TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEA 180

Query: 181 ELTQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEFE 240
           EL  DAA+LKR+W+KV+ER+ + + R  LYGEL LAQR+LRDF   EL +I +DSR  +E
Sbjct: 181 ELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYE 240

Query: 241 NLKEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAM 300
            L EFTSEY+PE+T+KLE Y G +PIFD++D ENEIQR+LERKVELKSGGYLIIDQTEAM
Sbjct: 241 ALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM 300

Query: 301 TTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKRV 360
           TT+DINTGAFVG RNL++TIFNTNIEATQAIARQLRLRNLGGIIIIDFIDM +++HR+RV
Sbjct: 301 TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV 360

Query: 361 LTSLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVETV 420
           L SLE AL KDRVKT++NGF+ LGLVEMTRKRTRESIEHVLC+ CPTC GRG+VKTVETV
Sbjct: 361 LHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETV 420

Query: 421 CFEILREITRVNRAYDADKFVVYASPAVADTLQGEESHALAELEVFIGKEVRIQAEPLYN 480
           C+EI+REI RV+ AYD+D+F+VYASPAVA+ L+GEESH+LAE+E+F+GK+V++Q EPLYN
Sbjct: 421 CYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYN 480

Query: 481 QEQFDVVMM 489
           QEQFDVVMM
Sbjct: 481 QEQFDVVMM 489