Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 1065 a.a., ribonuclease E from Dickeya dadantii 3937

 Score =  273 bits (697), Expect = 3e-77
 Identities = 163/466 (34%), Positives = 256/466 (54%), Gaps = 12/466 (2%)

Query: 5   LLLNVTPSET-RVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLD 63
           +L+N T  E  RVA+++G  L ++ IE         NIYKGK++R+ P ++AAFVD G +
Sbjct: 4   MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAE 63

Query: 64  KAAFLHASDIVPHTECVAESEKQQFQVR---DISELVRQGQDIVVQVVKDPLGTKGARLT 120
           +  FL      P  E   E     +      +I +++R+GQ+++VQV K+  G KGA LT
Sbjct: 64  RHGFL------PLKEIAREYFPSNYNAHGRPNIKDVLREGQEVIVQVDKEERGNKGAALT 117

Query: 121 TDITLPSRYLVFMPGASHVG-VSQRIESEAERERLKKIVSHYCDEHGGFIIRTAAEGANE 179
           T I+L   YLV MP     G +S+RIE +   E  + + S    +  G I+RTA  G + 
Sbjct: 118 TFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALGSLELPDGMGLIVRTAGVGKSA 177

Query: 180 KELTQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEF 239
             L  D AF  + W  + +         +++ E  +  R  RD++  ++ +ILID+ +  
Sbjct: 178 DALQWDLAFRLKHWEAIKKAAEGRAAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKIL 237

Query: 240 ENLKEFTSEYV-PELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTE 298
           E  KE  +    P+ ++K++LY G+ P+F  Y  E++I+ + +R+V L SGG ++ID TE
Sbjct: 238 ELAKEHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTE 297

Query: 299 AMTTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRK 358
           A+T IDIN+       ++EET FNTN+EA   IARQLRLR+LGG+I+IDFIDM    H++
Sbjct: 298 ALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQR 357

Query: 359 RVLTSLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVE 418
            V   L  A+ +DR +  I   ++ GL+EM+R+R   S+       CP C G G+++  E
Sbjct: 358 EVENRLRDAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTIRDNE 417

Query: 419 TVCFEILREITRVNRAYDADKFVVYASPAVADTLQGEESHALAELE 464
           ++   ILR I       +  +        +A  L  E+  A+  +E
Sbjct: 418 SLSLSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKREAVNAIE 463