Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., Ribonuclease G from Azospirillum sp. SherDot2

 Score =  192 bits (487), Expect = 2e-53
 Identities = 124/404 (30%), Positives = 205/404 (50%), Gaps = 23/404 (5%)

Query: 4   ELLLNVTPSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLD 63
           ELL++     TR A++  G L ++HI+   +  ++G I  G+V R+  G+  AFVD+G  
Sbjct: 5   ELLVDRDGPLTRAAVLTDGRLTDLHIDHAGRPSLLGAIILGRVERIATGLNGAFVDLGNG 64

Query: 64  KAAFLHASD----IVPHTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARL 119
            +  L A+D    I+      +   +   +   I  L+R GQ ++VQV  D  G KG  L
Sbjct: 65  LSGLLPAADVRRPILDDDSPQSRPHRPGAKQAPIGALLRTGQPVLVQVKADAAGAKGPSL 124

Query: 120 TTDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKIVSHYCDEHGGFIIRTAAEGANE 179
           T DITLP R+LV  P    + VS+R+ S  ER  L + +        G+I+R  A   ++
Sbjct: 125 TMDITLPGRFLVHAPLGRDIAVSKRLGSGPERATLARRIEQLATG-AGWIVRAGAAQVSD 183

Query: 180 KELTQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEF 239
             L  ++  L   W  + +         +L+       R L +        IL+D     
Sbjct: 184 ALLAAESEALHLQWRAIRDDARAGSAPRLLHPGPDAPTRALIEQGAAAPAAILVDDPPPT 243

Query: 240 ENLK-----------EFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKS 288
           + ++           ++   + P+L  +L  +   + +FD++D ++ I   L+ +V L  
Sbjct: 244 DGIRIGDGPLLSSLCDWCGHHAPDLLPRLAGHTDAQRLFDLHDLDSAIAGLLDVRVPLPL 303

Query: 289 GGYLIIDQTEAMTTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDF 348
           GG L+I++TEA+T +D+N G             + N++A   IARQLRLRN+GGI+++DF
Sbjct: 304 GGSLVIERTEALTVVDVNAGE-------RGNPLDVNLDAAAEIARQLRLRNVGGIVVVDF 356

Query: 349 IDMASDEHRKRVLTSLETALMKDRVKTNINGFTQLGLVEMTRKR 392
           ++M S    +RVL +L  A+  D V+T + G ++LGLVE+TR R
Sbjct: 357 VNMRSRGDAERVLAALSQAVESDPVQTQVYGMSKLGLVELTRTR 400