Pairwise Alignments

Query, 347 a.a., rod shape-determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., chaperone protein HscA from Pseudomonas simiae WCS417

 Score = 56.6 bits (135), Expect = 2e-12
 Identities = 79/361 (21%), Positives = 143/361 (39%), Gaps = 58/361 (16%)

Query: 13  LSIDLGTANTLIYVKGQGIV---------LDEPSVVAIRQDK---GRGGKTVAAVGH--- 57
           + IDLGT N+L+     G+          +  PS V    D+   G   K  A+      
Sbjct: 22  VGIDLGTTNSLVAALRSGLSEPLPDADGQVILPSAVRYHADRTEVGESAKLAASTDPLNT 81

Query: 58  --AAKQMLGRTPGNISAIRPMKDGVIADFYVTEKMLQHFIRQVHDNSVLKPSPRVL---- 111
             + K+++GR    +S ++ + D +   F   E  +          S ++ S  +L    
Sbjct: 82  VLSVKRLMGR---GLSDVKQLGDQLPYRFVGGESHMPFIDTVQGPKSPVEVSADILKVLR 138

Query: 112 ---------------VCVPCGSTQVERRAIRESALGAGAREVYLIDEPMAAAIGAGLRVS 156
                          + VP      +R+A +++A  AG   + L++EP AAA+  GL   
Sbjct: 139 QRAEKTLGGELVGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAVAYGLDQH 198

Query: 157 EPTGSMVIDIGGGTTEVAVISLNGVVY-----SSSVRIGGDRFDEAIINYVRRNYGSLIG 211
                 + D+GGGT +++++ L G V+          +GGD FD AI  ++  + G    
Sbjct: 199 AEGLVAIYDLGGGTFDISILRLTGGVFEVLATGGDSALGGDDFDHAIAGWIISSAGLSAD 258

Query: 212 EATAEK---IKHEIGSAYPGDDVQEIEVRGRNLAEGVPRSFTLNSNEILEALQEPLTGIV 268
               E+   ++    +     D   +EV     +  + R       E  +AL EP+   V
Sbjct: 259 LDPGEQRNLLQTACAAKEALTDAATVEVSYGTWSAQLTR-------EAFDALIEPM---V 308

Query: 269 SAVMVALEQCPPELASDISENG-MVLTGGGALLKDLDRLLMEETGIPVVIADDPLTCVAR 327
           +  + A  +   +   ++ + G +V+ GG   +  +   + E  G   +   DP   VA 
Sbjct: 309 ARSLKACRRAVRDSGIELEDVGAVVMVGGSTRVPRVREAVAEAFGRQPLTEIDPDQVVAI 368

Query: 328 G 328
           G
Sbjct: 369 G 369