Pairwise Alignments

Query, 347 a.a., rod shape-determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 40/244 (16%)

Query: 14  SIDLGTANTLIYVKGQGIVLDEPSVVAIRQDKGRGGKTVAAVGH--------AAKQMLGR 65
           S+  GTA+TL+  +G+ I+   PSVV    D  R G                + K++LGR
Sbjct: 35  SVRSGTASTLVDSQGRSIL---PSVVNYGADATRVGYPAREQAETDPHNTVISVKRLLGR 91

Query: 66  TPGNISAIRPMKDGVIADFYVTEKMLQHFIRQVHDNSVLKPSPRVL-------------- 111
           +  +I+   P    +   F  +EK L        D + ++ S  +L              
Sbjct: 92  SLQDINQRYPH---LPYRFKASEKGLPIVQTAQGDKNPIQISADILKALAERATATLGGE 148

Query: 112 -----VCVPCGSTQVERRAIRESALGAGAREVYLIDEPMAAAIGAGLRVSEPTGSMVIDI 166
                + VP      +R A +++A  AG   + L++EP AAAI  GL   +     V D+
Sbjct: 149 LAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDL 208

Query: 167 GGGTTEVAVISLNGVVY-----SSSVRIGGDRFDEAIINYVRRNYGSLIGEATAEKIKHE 221
           GGGT +++++ L+  V+          +GGD FD  I ++++   G  +   TAE+ +  
Sbjct: 209 GGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLIADHLQAQIG--LTSLTAEQQRAL 266

Query: 222 IGSA 225
           I +A
Sbjct: 267 INAA 270



 Score = 25.0 bits (53), Expect = 0.005
 Identities = 49/211 (23%), Positives = 72/211 (34%), Gaps = 33/211 (15%)

Query: 145 MAAAIGAGLRVSEPTGSMVIDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRR 204
           +AA I  G      T S+V  +  GT    V S    +  S V  G    D   + Y  R
Sbjct: 20  LAAGIDLGT-----TNSLVASVRSGTASTLVDSQGRSILPSVVNYGA---DATRVGYPAR 71

Query: 205 NYGSLIGEATAEKIKHEIGSAYPGDDVQE----IEVRGRNLAEGVPRSFTLN-------- 252
                    T   +K  +G +    D+ +    +  R +   +G+P   T          
Sbjct: 72  EQAETDPHNTVISVKRLLGRSL--QDINQRYPHLPYRFKASEKGLPIVQTAQGDKNPIQI 129

Query: 253 SNEILEALQEPLTGIVSAVMVALEQCPPELASDISENGMVLTGGGALLKDLD--RLLMEE 310
           S +IL+AL E  T  +   +  +    P    D      V T   A L  L   RLL E 
Sbjct: 130 SADILKALAERATATLGGELAGVVITVPAYFDDAQR---VATKDAAALAGLHVLRLLNEP 186

Query: 311 TGIPVVIADDPLTCVARGGGKALEMIDMHGG 341
           T   +    D       G    + + D+ GG
Sbjct: 187 TAAAIAYGLD------SGQEGVIAVYDLGGG 211