Pairwise Alignments

Query, 347 a.a., rod shape-determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., chaperone protein HscA (NCBI) from Escherichia coli BW25113

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 83/355 (23%), Positives = 150/355 (42%), Gaps = 50/355 (14%)

Query: 15  IDLGTANTLIYV--KGQGIVLDE-------PSVVAIRQDK---GRGGKTVAAVGHA---- 58
           IDLGT N+L+     GQ   L +       PSVV  +Q     G   +T AA+  A    
Sbjct: 24  IDLGTTNSLVATVRSGQAETLADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTIS 83

Query: 59  -AKQMLGRTPGNISAIRP-----------------MKDGVIADFYVTEKMLQHFIRQVHD 100
             K+++GR+  +I    P                    G++    V+  +L+    +  +
Sbjct: 84  SVKRLMGRSLADIQQRYPHLPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATE 143

Query: 101 NSVLKPSPRVLVCVPCGSTQVERRAIRESALGAGAREVYLIDEPMAAAIGAGLRVSEPTG 160
            ++      V++ VP      +R+  +++A  AG   + L++EP AAAI  GL   +   
Sbjct: 144 -ALAGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGV 202

Query: 161 SMVIDIGGGTTEVAVISLNGVVY-----SSSVRIGGDRFDEAIINYVRRNYGSLIGEATA 215
             V D+GGGT +++++ L+  V+          +GGD FD  + +Y+R   G  I + + 
Sbjct: 203 IAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLLADYIREQAG--IPDRSD 260

Query: 216 EKIKHEIGSAYPGDDVQEIEVRGRNLAEGVPRSFTLNSNEI-LEALQEPLTGIVSAVMVA 274
            +++ E+  A     +   +      A+ V  +      EI  E   E +  +V   ++A
Sbjct: 261 NRVQRELLDAAIAAKIALSD------ADSVTVNVAGWQGEISREQFNELIAPLVKRTLLA 314

Query: 275 LEQCPPELASDISE-NGMVLTGGGALLKDLDRLLMEETGIPVVIADDPLTCVARG 328
             +   +   +  E   +V+ GG   +  +   + E  G P + + DP   VA G
Sbjct: 315 CRRALKDAGVEADEVLEVVMVGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIG 369