Pairwise Alignments

Query, 347 a.a., rod shape-determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., molecular chaperone DnaK (NCBI) from Escherichia coli BW25113

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 66/279 (23%), Positives = 118/279 (42%), Gaps = 65/279 (23%)

Query: 13  LSIDLGTANTLIYVKGQGI--VLDE-------PSVVAIRQDK----GRGGKTVAAVG--- 56
           + IDLGT N+ + +       VL+        PS++A  QD     G+  K  A      
Sbjct: 5   IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64

Query: 57  --HAAKQMLGR-------------------TPGNISAIRPMKDGVIADFYVTEKMLQHFI 95
              A K+++GR                      N  A   +K   +A   ++ ++L+  +
Sbjct: 65  TLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKK-M 123

Query: 96  RQVHDNSVLKPSPRVLVCVPCGSTQVERRAIRESALGAGAREVYLIDEPMAAAIGAGLRV 155
           ++  ++ + +P    ++ VP      +R+A +++   AG     +I+EP AAA+  GL  
Sbjct: 124 KKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL-- 181

Query: 156 SEPTGSMVI---DIGGGTTEVAVISLNGV---------VYSSSVRIGGDRFDEAIINYVR 203
            + TG+  I   D+GGGT ++++I ++ V           +    +GG+ FD  +INY+ 
Sbjct: 182 DKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241

Query: 204 RNYGSLIG-------------EATAEKIKHEIGSAYPGD 229
             +    G             +  AEK K E+ SA   D
Sbjct: 242 EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTD 280