Pairwise Alignments

Query, 184 a.a., MSHA biogenesis protein MshB from Vibrio cholerae E7946 ATCC 55056

Subject, 174 a.a., type II secretion system protein from Vibrio cholerae E7946 ATCC 55056

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 12/85 (14%)

Query: 6  QGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGF--ATGVLSARAQWEA 63
          QGF+L+EL+I IV++G++AV A PRF++++ +AK  ++  VA G   A  +L ++A  E 
Sbjct: 5  QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALIEG 64

Query: 64 Q----------ARPTLTANNYPSIN 78
          Q             T   N YPS+N
Sbjct: 65 QDIGKGEITINGVKTPLLNGYPSVN 89