Pairwise Alignments

Query, 184 a.a., MSHA biogenesis protein MshB from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., MSHA pilin protein MshA from Vibrio cholerae E7946 ATCC 55056

 Score = 65.5 bits (158), Expect = 5e-16
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 14/141 (9%)

Query: 3   KMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQWE 62
           K Q GF+L+ELV+VIV++G+LAV A PRFL++  +A++AS+EG+ G  A  +  +  +  
Sbjct: 5   KRQGGFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISYGRAA 64

Query: 63  AQARPTLTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDATYPSGLTDQACIDLM 122
            +   TL    Y   N  G     T      ++ GYP  +N  D+T   G        +M
Sbjct: 65  IKGIETLDYTAYTDANTPG-----TVIDGIAHKFGYPTAVN--DSTANLG-------GIM 110

Query: 123 NNLLQNPPQVGTETQAASNSN 143
             L  +   +  ++   +NSN
Sbjct: 111 QTLDTSSEFIALQSSTGTNSN 131