Pairwise Alignments

Query, 184 a.a., MSHA biogenesis protein MshB from Vibrio cholerae E7946 ATCC 55056

Subject, 195 a.a., Pilin from Alteromonas macleodii MIT1002

 Score =  117 bits (294), Expect = 1e-31
 Identities = 78/199 (39%), Positives = 113/199 (56%), Gaps = 23/199 (11%)

Query: 1   MKKMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQ 60
           MK  QQGF+L+EL+IV++++GLLA  ALPRF+DVTDEA++AS+EGVAGGFA  V   RAQ
Sbjct: 1   MKTKQQGFTLIELIIVVIILGLLAATALPRFIDVTDEAREASVEGVAGGFAAAVGLVRAQ 60

Query: 61  WEAQARPTLTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDATYPSGLTDQACID 120
           WE + RP   + N  + N   + +  T     G   GYP G +T + T  S + D  C +
Sbjct: 61  WEVEGRP---SGNNGNGNGTVITYDQTQVGVDG-TIGYPTGSSTGN-TLISTVNDTECKN 115

Query: 121 LMNNLLQNPPQVGTETQAASNSNYKYSAKA-NSGAAT-CTYAQNEK-------------- 164
           + + +LQ+ P   T T     ++++Y+ +  +SGA T C Y   E               
Sbjct: 116 VFDLILQSAPTNTTSTNDTVVADFRYAVREDDSGANTLCVYYLVESMGLPNSSAPADGTP 175

Query: 165 -GSQHE-FVYEVNTGRVTV 181
            G+ ++ F Y   TG+VTV
Sbjct: 176 DGATYDGFTYNPATGQVTV 194