Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., Predicted secretion system X protein GspF-like from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  135 bits (341), Expect = 2e-36
 Identities = 85/343 (24%), Positives = 173/343 (50%), Gaps = 12/343 (3%)

Query: 69  LVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLSASMQLHPA 128
           L++F +++ SL  +GV ++ ++  LA+      ++A L  +   L  G+  S ++Q  P 
Sbjct: 61  LLLFSQELLSLLSSGVSIVEAVETLAEKESRAPVRAVLQQILLSLREGQTFSGALQALPQ 120

Query: 129 IFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVITFVLLAMFI 188
            F PL+V+ ++  E T  L +AL +   Y  Q    R ++ +A  YP  +I    L +  
Sbjct: 121 NFPPLYVATVRASERTSNLGEALGRYIAYATQLETLRGKLVSAAIYPAMLIGVSSLVILF 180

Query: 189 LNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAFRAWVNTTN 248
           L   V+P+F+ ++   G  LP  +R+++        +W +LLG++V L  A        +
Sbjct: 181 LMGYVVPRFSHIYEDMGDQLPFMSRLMLQWGQAVEQHWPVLLGLMVALGAAL------VS 234

Query: 249 GRIRWDHLRL-----RMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAEAIDNK 303
           G  RW   R+     R+P VG+ +   QL+R  RT  ++L  G+ +  +L +    + + 
Sbjct: 235 GGGRWLAQRIAGQLWRIPAVGERMRVFQLARLYRTLGMLLRGGIAIVPALEMVGGLL-SP 293

Query: 304 FLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSDFYDRE 363
            L+ R+L    +I  G  +S       + T + ++M+ VGE TG + E++   + F+D E
Sbjct: 294 ALQPRLLAATGRIREGQPMSQAFEAQGLSTAVSLRMLRVGERTGNMGEMMERAAAFHDEE 353

Query: 364 VDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMWGMMDALK 406
           +    +  T  + P L++ +  ++  + + ++LP++ + ++++
Sbjct: 354 LARWAEWATRLLGPALMLIMGLVIGAIVVLMYLPIFQLAESVQ 396