Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., General secretion pathway protein F / Type II secretory pathway, component PulF from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  164 bits (415), Expect = 4e-45
 Identities = 104/402 (25%), Positives = 197/402 (49%), Gaps = 11/402 (2%)

Query: 4   FYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAE---KSAFDFNWKALL 60
           + ++  +A G+   GL++A T   A  ML  + +VP  +   A      +A  FN     
Sbjct: 4   YTFEALDAQGATQKGLIDADTARAARSMLRARALVPLLVEPAAGSPGASAAKGFNITLWG 63

Query: 61  TPSVPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLS 120
             +     L ++ RQ+  L  AG+PL R++  L +   +++ +  + S+ +E+  G   +
Sbjct: 64  GRAFSATALAVWTRQLAGLVAAGLPLERALSALTEESEDEKQRNLMASLRSEVNGGSTFA 123

Query: 121 ASMQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVIT 180
            ++  HP  FSP++  +I  GE +G L   L +LA   E     + +I  A  YP  V  
Sbjct: 124 RALAQHPREFSPIYTGVIAAGEQSGLLGTVLERLADDLEAREALKNKIVAASLYPAIVTL 183

Query: 181 FVLLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIV----GL 236
             ++ +  L   V+PQ  ++F+     LP  T +++  SDF  +Y   +L ++     G+
Sbjct: 184 VAIVIVVFLVSYVVPQVANVFAGSKRALPFLTVVMLGLSDFVRSYGWFMLALLALGVGGV 243

Query: 237 LFAFRAWVNTTNGRIRWDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALS 296
           +FA R        R+R D   LR+P+VG +      +RFA T +++ +AGVP+ ++L  +
Sbjct: 244 VFARR----NEAIRLRMDAAWLRLPLVGRLARGYNAARFAATLAMLAAAGVPILRALQTA 299

Query: 297 AEAIDNKFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEV 356
           AE + N+ +    L+    +  G  +++   +   F PLV     +GE+TG++  +L   
Sbjct: 300 AETLSNQAMRADALDTVVLVREGAPLASALGSKKRFPPLVSMFARLGEQTGQLPSMLDRA 359

Query: 357 SDFYDREVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPM 398
           +     EV      +   +EP+L+V +  +V+++ L + +P+
Sbjct: 360 AKQLGDEVQRRAMHMATILEPLLIVGMGLVVMLIVLAVLMPI 401