Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Type II secretory pathway, component PulF from Kangiella aquimarina DSM 16071

 Score =  216 bits (549), Expect = 1e-60
 Identities = 123/406 (30%), Positives = 229/406 (56%), Gaps = 11/406 (2%)

Query: 1   MATFYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALL 60
           +  F + G N  G K  G + A  +++  + LL +GI P +I    AE  +F  + K++ 
Sbjct: 19  LKNFQWTGVNKQGQKIKGKMPAENQDIVKQQLLKQGITPKAIN---AELFSFGGSKKSIK 75

Query: 61  TPSVPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLS 120
               P+++ V F RQ+  + KAGVPL++S   + +   N  ++  +  V  ++ +G   +
Sbjct: 76  ----PVDIAV-FLRQLAIMMKAGVPLVQSFDIIGKGHENPSVQDLVMDVKQDVESGNPFA 130

Query: 121 ASMQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVIT 180
            S++ HP  F  L   +I  GE +G L+Q L ++A Y E+    + +IK+A+ YP  V+ 
Sbjct: 131 ESLRKHPKYFDDLVCDLIHAGEQSGTLEQMLDRIATYKEKSEALKSKIKSALMYPAAVVV 190

Query: 181 FVLLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAF 240
             +    IL + V+P F+ +F   G DLP  T++++  S+    YW L L +++G++ A+
Sbjct: 191 VSIAVTAILLIYVVPMFSQLFEGAGADLPAFTQMVVDMSENVQQYWYLYLFVMIGIVVAY 250

Query: 241 RAWVNTTNGRIR--WDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAE 298
            + +N ++   R   D L L+ PI G ++ +A ++R+ART +   +AGVPL  +L  +A 
Sbjct: 251 -SQLNKSSQSFRDGKDKLLLKFPIFGPLIQKAAVARYARTLATTFAAGVPLVDALDSAAG 309

Query: 299 AIDNKFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSD 358
           A  N      I ++K  + +G+ ++    +  +F  +V QM+++GEE+G +D +L +V+D
Sbjct: 310 ASGNAVYRDAIKKIKEDVTTGLQINMAMASTGVFPNMVTQMVAIGEESGAVDTMLAKVAD 369

Query: 359 FYDREVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMWGMMDA 404
            Y++EVD  +  +++ IEP ++VF+  +V  L + ++LP++ M  A
Sbjct: 370 IYEQEVDDAVDGISSLIEPFVIVFLGTVVGGLVVAMYLPVFQMGSA 415