Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Type II secretory pathway, component PulF from Enterobacter asburiae PDN3

 Score =  184 bits (467), Expect = 4e-51
 Identities = 102/333 (30%), Positives = 186/333 (55%), Gaps = 6/333 (1%)

Query: 74  RQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLSASMQLHPAIFSPL 133
           RQ+ +L +AG+ L  S++ LA+    K  +A L S+ +EL+ G   SAS++  PA+FSPL
Sbjct: 64  RQLATLLQAGLTLSHSLQMLAEQHPLKPWQALLQSIADELSEGSPFSASLKKWPAVFSPL 123

Query: 134 FVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVITFVLLAMFILNVKV 193
            VSM++ GE TG+L++   QLA   + + + R+++K ++RYP  V+T  +L +  + + V
Sbjct: 124 HVSMVKTGELTGKLEECCRQLAQQQKAQQQLREKVKKSLRYPAIVLTLAVLVVLAMVILV 183

Query: 194 IPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAF-RAWVNTTNGRIR 252
           +P+F +++  F   LP+ T++++  + F  +Y    L +   LL  F  AW    N   R
Sbjct: 184 LPEFAAIYKTFNTPLPMLTQMVMGMAAFMRSY---ALALFAALLAPFATAWALRQNP--R 238

Query: 253 WDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAEAIDNKFLEQRILEM 312
           W  + + MP++G +    +L       SL   AG+P  Q L  + E +++ +    +  +
Sbjct: 239 WQRMLMHMPVMGALAKGQKLGHIFTVLSLTQQAGIPFLQGLESAEETVESCYWRGILCCV 298

Query: 313 KSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSDFYDREVDYDLKTLT 372
           +  IE G+ V ++   A IFTPL IQ++  GE +G +D +L  ++  +  +       L 
Sbjct: 299 REDIEKGLPVWSSFQKAAIFTPLCIQLLRTGEMSGALDIMLANLARHHTEQTFQRADNLA 358

Query: 373 ARIEPILLVFVAAMVLVLALGIFLPMWGMMDAL 405
           A +EP+LL+    ++  L + ++LP++ + DA+
Sbjct: 359 ALLEPVLLIVTGVIIGTLVVAMYLPIFHLGDAM 391