Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., type II secretion system protein F from Enterobacter asburiae PDN3

 Score =  169 bits (428), Expect = 1e-46
 Identities = 108/402 (26%), Positives = 203/402 (50%), Gaps = 12/402 (2%)

Query: 1   MATFYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALL 60
           MA + +   +A G    G ++A   +   +ML  + ++P +IA  +   +  +    A L
Sbjct: 1   MAWYAWSATDAAGKTQRGTLQAEGPKQVRQMLREQKLMPVNIAPTSDPSAGKNARKGAKL 60

Query: 61  TPSVPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLS 120
             S+P  VL +F RQ+ +L  A +PL  +++ +A+   +K L A +  + +++  G  L 
Sbjct: 61  --SIP--VLSMFTRQLATLVNAALPLESALKAIAKQTEDKTLAAMVSEIRDKIVEGHTLF 116

Query: 121 ASMQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVIT 180
            +    P  F  L+ +++  GE TG L   L +LA Y EQ  + + ++  AM YP  +  
Sbjct: 117 DAFSQFPRSFDKLYCTLVMAGEKTGHLGGVLEKLAEYNEQRQKMKSKLTQAMVYPITLTV 176

Query: 181 FVLLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLL-GIIVGLLFA 239
             +  + IL V V+PQ    F+    +LP+ TR LI  SD F+  WG+++ G + G   +
Sbjct: 177 VAIAVISILLVAVVPQVIDQFTHMKQELPVTTRTLIAVSD-FLQAWGIVIAGGLFGASAS 235

Query: 240 FRAWVNTTNGRI---RWDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALS 296
           F+ W+     R    RW  L L+ P+   +V     +R+ RT S++ ++ VPL + + ++
Sbjct: 236 FKFWIKVEKNRFVYHRW--LLLKSPL-KKLVCAINSARYIRTLSILQASSVPLLEGMYIA 292

Query: 297 AEAIDNKFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEV 356
            + I+N +  Q + +    +  G ++      A IF P ++ M++ GEE+G +  L+   
Sbjct: 293 MDGIENLYARQVLEQAADTVRQGASLYNALEQARIFPPTMLYMVASGEESGELGSLMDRA 352

Query: 357 SDFYDREVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPM 398
           ++  +  + + +    +  EP L+V +A +VL + L I  P+
Sbjct: 353 AENQESALQHRITLTLSVFEPALVVTMATVVLFIVLSILQPL 394