Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., Type II secretion system protein F from Acinetobacter radioresistens SK82

 Score =  221 bits (562), Expect = 4e-62
 Identities = 124/402 (30%), Positives = 223/402 (55%), Gaps = 7/402 (1%)

Query: 1   MATFYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALL 60
           M TF Y G +  G K  G + A    LA   L  +GI   +I +            + L+
Sbjct: 9   MPTFAYDGVDRKGIKVKGELTAKNMALAKVTLRKQGITIKTIREKRRNIL------EGLM 62

Query: 61  TPSVPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLS 120
              V    + IF RQ+ ++ KAGVPL++    +A+   N  ++  +  +  E+  G   +
Sbjct: 63  KKRVSTLDITIFTRQLATMMKAGVPLVQGFEIVAEGLENPAMREVVLGIKAEVEGGNTFA 122

Query: 121 ASMQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVIT 180
            +++ +P  F  LF S+++ GE +G L+  L ++A Y E+    +++IK AM+YP  VI 
Sbjct: 123 GALRKYPQYFDNLFCSLVESGEQSGALETMLDRVAIYKEKSELLKQKIKKAMKYPATVIV 182

Query: 181 FVLLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAF 240
             ++   IL VKV+P F  +FS FG DLP  T++++  S++   YW +L+  I  L+F F
Sbjct: 183 VAVIVTIILMVKVVPVFQDLFSSFGADLPAFTQMVVNMSNWMQKYWFILIIAIAALIFGF 242

Query: 241 -RAWVNTTNGRIRWDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAEA 299
             A   +   R   D + L++PI GD+V +A ++R++RT +   +AGVPL  +L  +A A
Sbjct: 243 LEAKKRSQKFRDALDRMALKLPIFGDLVYKAIIARYSRTLATTFAAGVPLIDALESTAGA 302

Query: 300 IDNKFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSDF 359
            +N   EQ +++++  + +G  +      +N F P+ +QM+++GEE+G +D +L +V+  
Sbjct: 303 TNNVIYEQAVMKIREDVATGQQLQFAMRASNRFPPMAVQMVAIGEESGALDAMLDKVATH 362

Query: 360 YDREVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMWGM 401
           ++ EVD  +  LT+ +EP+++  +  +V  L + ++LP++ M
Sbjct: 363 FENEVDNAVDGLTSMMEPLIMAILGVLVGGLVIAMYLPIFQM 404