Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., type II secretion system ATPase GspE from Rhodanobacter sp000427505 FW510-R12

 Score =  335 bits (860), Expect = 2e-96
 Identities = 207/557 (37%), Positives = 321/557 (57%), Gaps = 23/557 (4%)

Query: 14  LVEEGIVSEAQLEQALNAQKNTGRRLGDTLIS-LGFLSETQLLNFLAQQLSLPVI----- 67
           LV  G + E  L +A    + +       L++ LG +SE  L    A+ L +P++     
Sbjct: 27  LVARGRLKEGDLGRARRLHEESAEGTLTALMARLGLVSERDLAEAWAELLQVPLLAARDA 86

Query: 68  -DLSRAHVDIDAVPLLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEAL-LNQLPDY 125
            +L  A +D+ ++  L + H   ++    G  G  L + ++DPAD +  +A+ L      
Sbjct: 87  PELPPADLDL-SLRFLKQQHVVPVQD---GEHG--LALLVADPADPYPLQAVALAAGRPV 140

Query: 126 GFEFVIAPEKQLVDGF-DRYYRRTKEIV-SFAEQLHAEHKTNDSFDFEITDSDSDEVTVV 183
                +  E   +DG  +RYY   +  + +  E L       D  D E     + E  V+
Sbjct: 141 ALRVGLRSE---IDGLIERYYGTGRSAMGTIVENLDGSAAEED--DVEHLRDLASEAPVI 195

Query: 184 KLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLMAN 243
           +L+N + + A++  ASD+HIEP  N L++R RIDGVLHE      +  +A++ R+K+MA 
Sbjct: 196 RLVNLILQRAVEQRASDVHIEPFENRLKVRYRIDGVLHEVEAPPSSSTAAVISRVKIMAR 255

Query: 244 LDISEKRLPQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIPPH 303
           L+I+E+RLPQDGR  +RV+G+ +D+R+ST+P   GESVVMR+L++ + V      G    
Sbjct: 256 LNIAERRLPQDGRIQLRVQGKELDLRVSTVPTSFGESVVMRILDRESVVFDFASLGFTDR 315

Query: 304 LLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRINQ 363
              R    L+RPHG++LVTGPTGSGKTTTLY AL+ +NT+  KIIT EDPVEY++  INQ
Sbjct: 316 FQQRFVDVLERPHGILLVTGPTGSGKTTTLYTALSRINTNDVKIITVEDPVEYQLEGINQ 375

Query: 364 VQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTNDAV 423
           +QV P+I LDFS  LR+ +RQDPD+I++GEMRD ET  I +++ALTGHLVLSTLHTN A 
Sbjct: 376 IQVKPQIGLDFSGALRSIMRQDPDVIMIGEMRDLETCRIAIQSALTGHLVLSTLHTNSAA 435

Query: 424 DSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCS-GHDEVDEARRQWLVTRFPNQAA 482
               RL+DMG   YL+ S +  ++AQRLVR++ P+ +  +D + E   Q+ + ++ ++  
Sbjct: 436 GGITRLLDMGVEDYLLGSTINGILAQRLVRRLDPETAMPYDALPEVIEQFELHKYTDERP 495

Query: 483 AKFTRGRGCQNCNLTGYRGRIGVFEMLELDQPMMDCLRANDAVAFSKAARSNTDYKPLLA 542
            +  +  G    N +GYRGR  + E L +  P+   +    +    +    +   + +  
Sbjct: 496 IRLWK-PGSNAANPSGYRGRRAIMEFLTMSDPLRRLVMQRASEGDIERQARSEGMRTMYE 554

Query: 543 SAMELALQGIVSLDEVM 559
             +  A+ GI +L+EV+
Sbjct: 555 DGIAKAVAGITTLEEVL 571