Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., general secretion pathway protein GspE from Pseudomonas simiae WCS417

 Score =  324 bits (830), Expect = 6e-93
 Identities = 174/344 (50%), Positives = 228/344 (66%), Gaps = 18/344 (5%)

Query: 171 EITD--SDSDEVTVVKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEV 228
           EITD     D   V+++IN+L   A +  ASDIHIEP      +R R+DG L + +    
Sbjct: 92  EITDLLDTQDGAPVIRMINALLTQAARDEASDIHIEPYETHSVVRYRVDGTLRDVVSPRK 151

Query: 229 NIASALVLRLKLMANLDISEKRLPQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQ 288
            +  ALV R+K+MA LDI+EKRLPQDGR  +RV G+ +DIR+ST+P  HGE VVMRLL++
Sbjct: 152 ALHGALVSRIKIMAQLDIAEKRLPQDGRIALRVAGRPIDIRVSTVPTGHGERVVMRLLDK 211

Query: 289 SAGVRKLEESGIPPHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKII 348
            AG  +LE  G+ P LL RL   +++PHG++LVTGPTGSGKTT+LY AL  L+ S   I+
Sbjct: 212 QAGRLQLETLGMAPQLLARLDTLIRQPHGIVLVTGPTGSGKTTSLYAALARLDASTSNIL 271

Query: 349 TAEDPVEYRISRINQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAAL 408
           T EDPVEY +  I+Q+QVN KI++ F   LR  LRQDPDII++GE+RD ET +I ++A+L
Sbjct: 272 TVEDPVEYDLPGISQIQVNAKIDMTFGLALRAILRQDPDIIMIGEIRDLETAQIAVQASL 331

Query: 409 TGHLVLSTLHTNDAVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDEA 468
           TGHLVL+TLHTNDAV +  RLIDMG   +L+AS++  V+AQRLVR++CP C   D    A
Sbjct: 332 TGHLVLATLHTNDAVSAVNRLIDMGVEPFLLASSLLGVLAQRLVRRLCPHCKQED--PSA 389

Query: 469 RRQWLVTRFPNQAAAKFTRGRGCQNCNLTGYRGRIGVFEMLELD 512
              W              R  GC  CN  GY GR G+ E+  +D
Sbjct: 390 PGTW--------------RPVGCAQCNQIGYSGRTGIHELFCVD 419