Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

 Score =  350 bits (898), Expect = e-101
 Identities = 189/422 (44%), Positives = 269/422 (63%), Gaps = 10/422 (2%)

Query: 144 YYRRTKEIVSFAEQLHAEHKTNDSFDFEITDSDS-----DEVTVVKLINSLFEDAIQVGA 198
           Y R + E     E + A+     S   E+  ++      D+  ++KLIN++  +AI+ GA
Sbjct: 80  YQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGA 139

Query: 199 SDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLMANLDISEKRLPQDGRFN 258
           SDIHIE     L +R R+DGVL E L     ++S LV R+K+MA LDI+EKR+PQDGR +
Sbjct: 140 SDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRIS 199

Query: 259 IRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIPPHLLLRLRHQLKRPHGM 318
           +R+ G++VD+R+STMP  HGE VVMRLL+++A    L   G+  H     R  +KRPHG+
Sbjct: 200 LRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGI 259

Query: 319 ILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRINQVQVNPKINLDFSTLL 378
           ILVTGPTGSGK+TTLY  L ELN+S + I+T EDP+E+ I  I Q QVNP++++ F+  L
Sbjct: 260 ILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGL 319

Query: 379 RTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTNDAVDSALRLIDMGAPGYL 438
           R  LRQDPD+++VGE+RD ET +I ++A+LTGHLV+STLHTN AV +  RL DMG   +L
Sbjct: 320 RAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFL 379

Query: 439 VASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWLVTRFPNQAAAKFTRGRGCQNCNLTG 498
           ++S++  V+AQRLVR +CPDC    E D+ +R+   ++   +      R  GC  CN  G
Sbjct: 380 ISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSK--KKEPLILYRATGCPKCNHKG 437

Query: 499 YRGRIGVFEMLELDQPMMDCLRAN-DAVAFSKAARSNTDYKPLLASAMELALQGIVSLDE 557
           YRGR G+ E+L +D  + + + +     A  K  R+ T    +    ++   QGI SL+E
Sbjct: 438 YRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATT--PSIRDDGLDKVRQGITSLEE 495

Query: 558 VM 559
           VM
Sbjct: 496 VM 497