Pairwise Alignments

Query, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., type II secretion system ATPase GspE from Escherichia coli ECRC100

 Score =  327 bits (838), Expect = 7e-94
 Identities = 194/488 (39%), Positives = 288/488 (59%), Gaps = 10/488 (2%)

Query: 80  PLLPEVHARRLRALVIGRSGDTLRIAMSD-PADLFAQEALLNQLP-DYGFEFVIAPEKQL 137
           PLLP   +R  R L++          M D PA    +   + + P +       A EKQL
Sbjct: 13  PLLPFSFSRTQRILLLREQEGNRVFCMEDTPASALLEVRRVAEGPLNVTTVSAEAFEKQL 72

Query: 138 VDGFDRYYRRTKEIVS-FAEQLHAEHKTNDSFDFEITDSDSDEVTVVKLINSLFEDAIQV 196
           V  + R     +++++    ++       +  D E     +D+  +++LIN++  +AI+ 
Sbjct: 73  VSSYQRDSDEARQMMAEIGNEMDFYTVAGELPDREDLLDANDDAPIIRLINAMLTEAIKE 132

Query: 197 GASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLMANLDISEKRLPQDGR 256
            ASDIHIE     L++R RIDGVL E L    N+AS L+ R+K+MA LDI+EKR+PQDGR
Sbjct: 133 KASDIHIETYERHLQVRFRIDGVLREILRLHRNLASLLISRIKVMARLDIAEKRVPQDGR 192

Query: 257 FNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIPPHLLLRLRHQLKRPH 316
             +R+ G++VD+R+ST+P  HGE +V+RLL++++    L   G+       +   ++RPH
Sbjct: 193 MVLRIGGRAVDVRVSTLPSNHGERIVLRLLDKNSVSLDLAALGMSQQNQRHIDALIRRPH 252

Query: 317 GMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRINQVQVNPKINLDFST 376
           G+ILVTGPTGSGK+TTLY AL+ LN   + I+T EDPVEY +  I+Q QVNPK+++ F+ 
Sbjct: 253 GIILVTGPTGSGKSTTLYAALSLLNPRDRNIMTVEDPVEYELDGISQTQVNPKVDMTFAR 312

Query: 377 LLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTNDAVDSALRLIDMGAPG 436
            LR  LRQDPD++LVGE+RD ET +I ++A+LTGHLVLSTLHTN A  +  RL DMG P 
Sbjct: 313 SLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSAAGALSRLQDMGIPP 372

Query: 437 YLVASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWLVTRFPNQAAAKFTRGRGCQNCNL 496
           +L+++++ AV+AQRLVR +CP C    +V       L             +  GCQ+C+ 
Sbjct: 373 FLLSTSLLAVLAQRLVRTLCPRCRQPCQVSTE----LAMDMDIPPETTIWQPAGCQHCSF 428

Query: 497 TGYRGRIGVFEMLELDQPMMDCL-RANDAVAFSKAARSNTDYKPLLASAMELALQGIVSL 555
           TGY GR G+ E+L +D  +   + +    +  ++ A S   Y  L     +  L G  S 
Sbjct: 429 TGYHGRTGIHELLLIDDRIRTAIYQGEGELGITRLAGSR--YLTLRGDGRQKVLAGETSW 486

Query: 556 DEVMSLGE 563
           +EV+ + E
Sbjct: 487 EEVVRVTE 494