Pairwise Alignments

Query, 389 a.a., MSHA biogenesis protein MshN from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., putative PEP-CTERM system TPR-repeat lipoprotein from Alteromonas macleodii MIT1002

 Score =  109 bits (272), Expect = 2e-28
 Identities = 104/404 (25%), Positives = 169/404 (41%), Gaps = 37/404 (9%)

Query: 7   MSVVNEALAKSAQRSHSRLSNIERIDVAKPKARPAWLWVMLGFGVSLAVGGWSISLQS-- 64
           MS++N+ L    +R+ S    +      +   RP W   ++   V + V    I+L S  
Sbjct: 1   MSILNDTLKSLDERNKSEDFGLP--PTVEVSQRPVWPKALMIIAVLVFVVWLVITLLSGT 58

Query: 65  -----------VDTIPSSAEVVRPEVPSPTQKTTQQSIALYQAP---VNSEALVKNETLV 110
                         + S+A V  P   S   +    S A   AP   + S  L +++  +
Sbjct: 59  SHREKNEDGLSTTAVSSAARVNNPPAESTISERVADSTADINAPSQGMQSTPLSESDMAL 118

Query: 111 QKETLPKNETSVKNAVLAKVEGSPTSLKQTANRQREQTALGSELNAEPVLNLVDNSEPSF 170
           Q       E  V N V   +E      ++        T+   E  A  V N  + S P  
Sbjct: 119 QNRASDVAEL-VFNTVDESLEDDEAQYRKRVTTTASATSTADEAKASNVNNSANASSPQS 177

Query: 171 FEEEVSSL-PSSSPVM------------IVEQVSLTPEQLAQKALQRAQKAMESNELQTA 217
               VS + PSSS               +VE    +PEQ +   L+   KA        A
Sbjct: 178 ELSAVSKIQPSSSKAAEPKPTNIITREPVVEVAPKSPEQQSAVHLEAGLKAYNFGIFDEA 237

Query: 218 VSAYTEALRYTPHDEMARQKLAALYYGKGDGRKAFDLMQAGIERNPDGEVLRLALAKLLV 277
             ++T AL   P ++ AR++LAALY+G+ +  +A  ++  GI  +P   + R  +AK+LV
Sbjct: 238 QKSFTLALATFPQNDEARKQLAALYFGQNNNLQALQVLSEGIVISPSELIWRELMAKILV 297

Query: 278 KEK--QEASALVP---LAYLPSQPSIEYLSLRAALAQKTKQDEIARESYQQLTEKDPNNG 332
           +E   +E   L+P    A   ++  ++YL L+   AQ   + + A  ++  +T   PNN 
Sbjct: 298 QESRFEEVLNLMPDSLDAKALAEGRVDYLILKGTSAQTINKSDQAISAFSAMTSLQPNNA 357

Query: 333 RWWLGLAIQQERALQWPAAQHAYQQALNKVGLSSQSQAFIHQRL 376
           +WWL L +  +       A  +Y +AL   GLSS S  + + RL
Sbjct: 358 KWWLALGVNYDALADERLAISSYSRALAIGGLSSASAQYANSRL 401