Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., AAA family ATPase from Rhodanobacter sp000427505 FW510-R12

 Score =  132 bits (333), Expect = 8e-36
 Identities = 87/268 (32%), Positives = 136/268 (50%), Gaps = 4/268 (1%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MY + + L   PF LTPD  +      H  A+  L    E GEG   +TG VGTGKT++ 
Sbjct: 1   MYQAFYKLRGKPFQLTPDAGMLFPSKGHKRAMAYLLYGFEQGEGFVVITGAVGTGKTLLI 60

Query: 61  RMLLTHLGDE-VALIYLPNPMLSGEELRQAVAAELQLDVASPVR--VVEQIQTRLIELHQ 117
           + L   L    +A+  + +  L G+++  AVAA L L      +  +++ ++  LI LH 
Sbjct: 61  QKLFEELAHRNLAVASIASANLDGDDILPAVAAALALPFEGRGKEALLQDVKRHLISLHA 120

Query: 118 QGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFR 177
           +    + +VDEAQ L+  ALE LR+  N E     LLQ+ L+GQ EL   +  +H+ Q R
Sbjct: 121 RQTHALLVVDEAQTLTPAALEMLRILSNFEFRGRALLQVFLVGQTELRRIIVSNHMEQLR 180

Query: 178 QRITFNANLRPLTQAETEVYIESRLQK-AQAPYPLFNATLKKAVWRASQGIPRLINQICH 236
           QRI  +  L P+++ E+  Y+  RL        P     +   V+ AS GIPR IN +  
Sbjct: 181 QRIIASHRLDPMSEEESRAYVLHRLHAVGWNDDPELAPDVFTGVYLASGGIPRKINLVMD 240

Query: 237 KALLLAWHEQSPLVNQHHLFAAIHDTYD 264
           + LL  + E+   ++Q  L   + + ++
Sbjct: 241 RLLLHGYLEELHSLDQTELAIVLDEIHE 268