Pairwise Alignments

Query, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (426), Expect = 2e-46
 Identities = 100/254 (39%), Positives = 143/254 (56%), Gaps = 3/254 (1%)

Query: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60
           MYL+ FG ++LPF + P+         H EAI  L A +  G G + LTGEVGTGKT V 
Sbjct: 1   MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60

Query: 61  RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQLDV---ASPVRVVEQIQTRLIELHQ 117
           R +L  L  +     + NP  S  EL +A+  E ++     A+  ++ + +   L+  H 
Sbjct: 61  RAILASLPGKTRAGMILNPTFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAEHA 120

Query: 118 QGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFR 177
           QG +V+ ++DEAQ L+ + LE LRL  NLETE  KLL+++LIGQPEL  +L    LRQ  
Sbjct: 121 QGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQLA 180

Query: 178 QRITFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICHK 237
           QRIT   +L PL + +T  YI  R+++A     LFN    + +   + GIPRLIN +C  
Sbjct: 181 QRITGRYHLLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLINLVCDA 240

Query: 238 ALLLAWHEQSPLVN 251
           AL  A+    P ++
Sbjct: 241 ALKQAYQAGEPTLS 254