Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., type II and III secretion system protein family protein from Variovorax sp. OAS795

 Score = 77.8 bits (190), Expect = 8e-19
 Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 40/270 (14%)

Query: 278 VILEAKILEVTLSDGYQQGIN-WSKAFSSNGANYKI-----------GSGSITQDSNGNP 325
           V +E KI+E   S   Q G+N +S   +SNG ++ +           G    T     NP
Sbjct: 172 VQVEVKIVEFNRSVLKQAGLNIFSTRANSNGFSFGVFSPSSLRTASFGDRGTTGTEQNNP 231

Query: 326 ITSVLPGLDAIGNLLGGQSNVVISSGSFDAVISFMATQGDLNVLSSPRVTASNNQKAVIK 385
           +      L   G     ++ + ++ G       F+   G   VL+ P + A + Q A   
Sbjct: 232 LAQAFSLLFNFG-----KAGIALNVG-------FLEGNGMARVLAEPTLVALSGQSASFL 279

Query: 386 VGTDEYYVTDLSSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHVHPAVIE 445
            G +      + +  G G  +     I   PF  GI L VTP +     ++L V P   +
Sbjct: 280 AGGE----LPVPAPQGLGTTS-----IEYKPF--GIGLTVTPTVLSNDRIVLKVAPEASD 328

Query: 446 VEQQTKKILYRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVSKVPFLG 505
           ++      +     + +P    S R +D+ +   DG+  +IGGL+   T     KVP LG
Sbjct: 329 LDYTNSLSI---GGVAVPAI--STRRADTTVELGDGESFIIGGLVSRTTTSNADKVPLLG 383

Query: 506 DVPALGHLFRNTTKLTQKTELVILLKPTVV 535
           D+P LG  F+ T     + ELVIL+ P +V
Sbjct: 384 DIPVLGTFFKQTKYQMSEKELVILVTPHLV 413