Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., putative general protein secretion protein (VIMSS) from Escherichia coli BW25113

 Score = 99.8 bits (247), Expect = 3e-25
 Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 23/278 (8%)

Query: 277 QVILEAKILEVTLSDGYQQGINWS------KAFSSNGANYKIGSGSITQDSNGNPITSVL 330
           QV++EA I+EV   +G   G+ W+      + F++ G      +  +        ITS  
Sbjct: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406

Query: 331 PGLDAIGNLLGGQSNVVISSGSFDAVISFMATQGDLNVLSSPRVTASNNQKAVIKVGTDE 390
           P  D      G  +     +G +  +++ +A+    ++L++P +   +N+ A   VG D 
Sbjct: 407 PAWDMFSAYNGMAAGFF--NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464

Query: 391 YYVTDLSSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHVHPAVIEVEQQT 450
             ++   S   +GDN   + +        G  L VTPQ+++   VLL +   V  V+  +
Sbjct: 465 PVLS--GSQTTSGDNVFNTVERKTV----GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS 518

Query: 451 KKILYRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVSKVPFLGDVPAL 510
              L  +          + R   + +  K G+ VV+GGL+   + +QVSKVP LGD+P +
Sbjct: 519 NSTLGPT---------FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLV 569

Query: 511 GHLFRNTTKLTQKTELVILLKPTVVGVNTWQKELERSR 548
           G LFR T+    K  L++ ++PT++  +   + L + +
Sbjct: 570 GQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607