Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 710 a.a., general secretion pathway protein D from Kangiella aquimarina DSM 16071

 Score = 89.0 bits (219), Expect = 6e-22
 Identities = 85/341 (24%), Positives = 148/341 (43%), Gaps = 58/341 (17%)

Query: 247 QAGVLTLRAYPDEIRQVNEFLGISQQRMHRQVILEAKILEVTLSDGYQQGINWSKAFSSN 306
           +   L L A PD +R+ +  +     R  +QV +EA I+E++ +   + GI W   FS  
Sbjct: 335 ETNALVLTAPPDIMREFDSVIRALDIR-RKQVHVEAIIVEISDNKAKELGIQW--LFSPE 391

Query: 307 GANY----------------KIGSGSITQDSN------GNPITSVLPGLD---------- 334
           G++                 ++ +G+I+           +P T V+ G +          
Sbjct: 392 GSSTTPGGVVNFTNTGPGIGQVAAGAISARGTEEEVFVRDPDTGVITGTETIRTGGDNGA 451

Query: 335 AIGNLLGGQSNVVISSG-------SFDAVISFMATQGDLNVLSSPRVTASNNQKAVIKVG 387
           A+  +LGG   + +          S+ A I  +    D N LS P VT  +N +A+ K G
Sbjct: 452 ALAEVLGGMQGLGLGVARIRPDGFSWGAFIRALEGVTDSNTLSRPSVTTLDNVEAIFKSG 511

Query: 388 TDEYYVTDLSSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHVHPAVIEVE 447
            +   +T  +     GDN  ++P   +     G+ L +TPQI++   V L +   V  + 
Sbjct: 512 QEIPIITGST----LGDN-NSNPFQNVERKDVGVMLKLTPQINEGNYVRLDIEQEVSSIA 566

Query: 448 QQTKKILYRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVSKVPFLGDV 507
             T   +  ++           RE  + +   DG +VV+GGL+  +      KVP LGD+
Sbjct: 567 GSTNVDVVTNK-----------REVKTSVLVPDGGMVVLGGLIDDDIQQSSQKVPILGDI 615

Query: 508 PALGHLFRNTTKLTQKTELVILLKPTVVGVNTWQKELERSR 548
           P LGH F++      K  L+I + PTV+  +   +E+  ++
Sbjct: 616 PVLGHAFKSQRTQKIKRNLMIFIHPTVLKDDEELREISSAK 656