Pairwise Alignments

Query, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., type II secretion system protein D from Enterobacter asburiae PDN3

 Score =  102 bits (255), Expect = 3e-26
 Identities = 99/394 (25%), Positives = 174/394 (44%), Gaps = 47/394 (11%)

Query: 156 KRTGRSLTSITTGTITNTDTNN---SNSSSSSSSSISSNSSSDGSSSNSNSNRSDARGGT 212
           ++ G++   + T  + + +TN+   S S  +   + +  S  D   +N  + R       
Sbjct: 214 EQKGQNAPQLATKVVADDETNSLVISGSPDARQRTRTLISQLDREQNNEGNTRV-----F 268

Query: 213 EIETTNESDFWPLLEKAVAQLLGGSGGQTVIVNPQAG-----------VLTLRAYPDEIR 261
            ++  N S   P+L     QL   +GG      P AG            L + A P+ + 
Sbjct: 269 YLKYANASKVVPVLTGIGEQLKDKAGGGKSKAAPIAGDLNISADESTNSLVITAQPNVMN 328

Query: 262 QVNEFLGISQQRMHRQVILEAKILEVTLSDGYQQGINWSKAFSSNGANYKIGSGSITQDS 321
            + + +     R   QV++EA I EV   +G   G+ W+              G +   S
Sbjct: 329 SLEKVIDKLDIR-RPQVLVEAIIAEVQDGNGLDLGVQWTSKH-----------GGVQFGS 376

Query: 322 NGNPITSVLPGLDAIGNLLGGQSNVVISSGSFDAVISFMATQGDLNVLSSPRVTASNNQK 381
            G PI+ +      IG+  G  +     +G F A+++ ++T G  ++LS+P V   +N++
Sbjct: 377 TGLPISQIKKS-KVIGSYTGLATGFF--NGDFGALMTALSTNGKNDILSTPSVVTLDNKE 433

Query: 382 AVIKVGTDEYYVTDLSSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHVHP 441
           A   VG D   ++   S   +GDN   S +        G  L + PQI+D    ++H   
Sbjct: 434 ASFNVGQDVPVLS--GSQTTSGDNVFNSVERKTV----GTKLKIVPQINDGD--MIH--- 482

Query: 442 AVIEVEQQTKKILYRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVSKV 501
             +++EQ+   +   S          + R  ++ +    G  VV+GGLM++ T   VSKV
Sbjct: 483 --LKIEQEVSSVDNTSTADASLGPTFNTRTINNEVMVHSGQTVVLGGLMENVTKQSVSKV 540

Query: 502 PFLGDVPALGHLFRNTTKLTQKTELVILLKPTVV 535
           P LGD+P +G LFR T++ + K  L++ +  TV+
Sbjct: 541 PLLGDIPVVGQLFRYTSQDSAKRNLMVFIHTTVL 574