Pairwise Alignments

Query, 479 a.a., MSHA biogenesis protein MshI from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score = 57.0 bits (136), Expect = 9e-13
 Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 20/240 (8%)

Query: 11  IAPKVASQQLYVV-VQPEHLYFTSDDLSPIP---PQPLQQQSWQAVLVQTLQKHAVHDVQ 66
           +   V + +L++V ++      + + +S IP    QPL+QQ     L   L   A     
Sbjct: 17  VGVSVCASELHIVAIERSGDAVSLNSVSSIPYDQHQPLKQQ-----LSAALSPFAKSTCN 71

Query: 67  IHLVLHSQLYQTYQIEQPSIPREEWSAALPFLLKDMLSEKVTDVVADAHPLP-----GSG 121
           + +VL   +Y   Q+++P +  E+ + ALP+ L +++    +++V D    P     G  
Sbjct: 72  VSIVLSQDMYHMVQVDKPEMAEEDITTALPWTLGELVPYDSSNMVLDYVDYPVKSRTGGQ 131

Query: 122 KVQAYVISKRTILELQ-SMAVSAGLTLGRVIPEQAIWG--LVGGELSHFLLLHRSMGGSF 178
           K+  +   K ++  +  SMA      L  +  ++ +    +   + +  L++       F
Sbjct: 132 KIDVFAAEKSSLAAVAASMAKKKDKQLTHIHTKEVLATEMVPNDDYARLLIIQEPNSEPF 191

Query: 179 KLDAFVDRQCSF-QRTLRGITAPVTDNAASALQLDSLALELQRSIDYLSAQLKGGSLQQL 237
            +   V  Q  +  R LRG  + V +    +   D+L LE+QRS+D+  +QLK   L+++
Sbjct: 192 LM--IVRSQAIWLARRLRGFVSKVNEQTDLSQLSDTLGLEIQRSMDFYESQLKQPPLKEI 249