Pairwise Alignments

Query, 214 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., Transcriptional regulatory protein DegU from Azospirillum sp. SherDot2

 Score = 53.5 bits (127), Expect = 3e-12
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 12/110 (10%)

Query: 114 IAHGLGEIINGQNWLPRHVSSQLLHYYRYAFQSHQVQ----ATVD--------LTAREIQ 161
           +A  L  +  G +++P+ V+  LLH    +    + +    A +D        LT RE Q
Sbjct: 118 LAQALRLVAEGGSFVPKCVALDLLHMTDLSLDIDEAEEADGAPLDGEGAPSSPLTDREQQ 177

Query: 162 ILRCLQTGASNMQIAENLFISEFTVKSHLYQIFKKLNVKNRVKAIAWVNQ 211
           +L  L TGA+N +I  +L + E TVK H  +I +KL  +NR  A+    Q
Sbjct: 178 VLSMLATGATNKEIGRHLSLQEVTVKLHTRRILRKLGARNRTDAVRRAQQ 227