Pairwise Alignments

Query, 214 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., Transcriptional regulatory protein DegU from Azospirillum sp. SherDot2

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 9/99 (9%)

Query: 118 LGEIINGQNWLPRHVSSQLLHYYRYAFQSHQVQATV----DLTAREIQILRCLQTGASNM 173
           LGE++      P HV+  L+       Q +     +    DL+ RE+QILRCL  G SN 
Sbjct: 121 LGEVV-----YPTHVAGLLMAAANERPQHNPTPIAMPPSGDLSKREVQILRCLLAGQSNK 175

Query: 174 QIAENLFISEFTVKSHLYQIFKKLNVKNRVKAIAWVNQN 212
            IA NL I+E TVK H   + +K+N +NR +A  W  QN
Sbjct: 176 AIARNLHITESTVKMHFKNVMRKINAQNRTQAAVWAIQN 214