Pairwise Alignments
Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056
Subject, 935 a.a., uvrA paralog in Bacteroidetes (from data) from Pontibacter actiniarum KMM 6156, DSM 19842
Score = 784 bits (2025), Expect = 0.0
Identities = 426/947 (44%), Positives = 613/947 (64%), Gaps = 40/947 (4%)
Query: 4 IEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63
I ++GAR HNLKN+++ +PR+K IVITGLSGSGKSSLAFDTLYAEGQR YVESLS+YARQ
Sbjct: 18 IIIKGARVHNLKNLSVALPRNKFIVITGLSGSGKSSLAFDTLYAEGQRMYVESLSSYARQ 77
Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEH 123
FL M+KPDVD+I+G+SPAI+IEQK + N RSTVGT TE+YDYL+LLYAR+G+ P
Sbjct: 78 FLGRMDKPDVDYIKGISPAIAIEQKVSIKNNRSTVGTSTEIYDYLKLLYARIGKTYSPVS 137
Query: 124 QVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARIDGET 183
+K +++ +V+ + L + +++M+LA + + ++ K L+ L +G+ R + +
Sbjct: 138 GEVVKKDSVTDVVNFIFSLEDEARVMILAPLHQHQERTLAKELDLLLQKGYSRIYANEQV 197
Query: 184 C---DLTDPPKLELHKKHTIEVIVDR---FKVRSDLQQRLAESFETALELSGGIVVVAPM 237
+L + K +L K+ + ++VDR +K DL R+++S +TA G V +
Sbjct: 198 YFIEELLEEKKPKLGKE--VFILVDRAVIYKSDEDLAFRISDSVQTAFFEGHGECRV--L 253
Query: 238 EGDGEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDA 297
G+GEE++FS F G E FSFNNP GAC TC+G G DPD VI D
Sbjct: 254 YGNGEERVFSDRFELD--GMVFEEPSVNFFSFNNPYGACQTCEGFGSVLGIDPDLVIPDK 311
Query: 298 NLSLAQGAIRGW-DQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIE 356
+L++ +GAI W K + Q L +DF +H P+N+L++ QE++ G+
Sbjct: 312 SLTVYEGAIAPWRTDKMNEWLQPLLKNGIRFDFPIHRPYNELTEAEQELLWTGN------ 365
Query: 357 FKYINDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIE 416
KY F G+ + T R L++Y C C G+RL+ +
Sbjct: 366 -KY-------------FSGLNAFFKEIQSQTHKIQYRVMLSRYRGRTTCPECRGSRLRKD 411
Query: 417 ARNVFINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNY 476
A V + ++ +V + I L FFQ L+L +AE+++ E+++RL +L VGL Y
Sbjct: 412 ASYVKVGGKSITDLVLMPITQVLPFFQNLELTEHEHNVAERLVTEVSNRLGYLQRVGLGY 471
Query: 477 LNLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNL 536
L L+R + TLSGGE+QRI LA+ +G+ LVG MY+LDEPSIGLH +D+E+L+ L L+ +
Sbjct: 472 LTLNRLSNTLSGGESQRINLATSLGSALVGSMYILDEPSIGLHPKDSEQLIGVLRSLQQI 531
Query: 537 GNTVLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKK 596
GNTV+VVEH+E+ ++ AD +IDIGP AG GG ++ +G+ EE+ ++ T +YLSG +
Sbjct: 532 GNTVIVVEHEEEMMKAADQLIDIGPEAGSGGGNLMFQGSFEEMTQRADTYTSKYLSGKME 591
Query: 597 IAVPEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKI 656
+ VP QR + + +E+ GA NNLKN+ + +P+G+ T VTGVSGSGKSTLI
Sbjct: 592 VPVPAQR--RKWRNAIEIIGARENNLKNLSVKVPLGVMTVVTGVSGSGKSTLIK-KILAP 648
Query: 657 AHTALNGATTATPAPYRSIQG-LEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFA 715
A L+G+T + + G + V +DQ+PIG++ RSNP TY + IR L+A
Sbjct: 649 AMQKLHGSTAEATGKFDKLAGDYNKIEHVEFVDQNPIGKSSRSNPVTYVKAYDAIRTLYA 708
Query: 716 GTQESRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETL 775
++SRG++P FSFN+ GGRCE CQG+G +K+EM F+ D+Y+ C+ C G+R+ ++ L
Sbjct: 709 DQPLAKSRGFKPSHFSFNIEGGRCEVCQGEGQVKIEMQFMADIYLTCESCHGQRFKQDVL 768
Query: 776 EVRYKGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQ 835
+++YK K+I +VL+MT+ D+ +FF P I KL+ L DVGL YIRLGQS+ TLSGGEAQ
Sbjct: 769 DIKYKDKSISDVLEMTIADSIDFFADQPKIIEKLKPLNDVGLGYIRLGQSSNTLSGGEAQ 828
Query: 836 RVKLARELSK---RDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLD 892
RVKLA L+K L+I DEP+TGLHFHDI +LL+ ++ L ++GNTVV+IEHN+D
Sbjct: 829 RVKLASFLTKGAQPHQENILFIFDEPSTGLHFHDISKLLTSINALIENGNTVVIIEHNMD 888
Query: 893 VIKTADWIIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
++K ADWIIDLGPEGG GG ++ EGTPE++A++E + TARFLK L
Sbjct: 889 IVKCADWIIDLGPEGGTNGGHLLFEGTPEEMAKLEDNDTARFLKEKL 935
Score = 50.1 bits (118), Expect = 7e-10
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 607 DAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHTALNGATT 666
DA++ + +KGA +NLKN+ +++P F +TG+SGSGKS+L DT + + +
Sbjct: 13 DARQNIIIKGARVHNLKNLSVALPRNKFIVITGLSGSGKSSLAFDTLYAEGQRMYVESLS 72
Query: 667 ATPAPY------RSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFA 715
+ + + ++ I I+Q + RS T T I+ ++ L+A
Sbjct: 73 SYARQFLGRMDKPDVDYIKGISPAIAIEQKVSIKNNRSTVGTSTEIYDYLKLLYA 127