Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 943 a.a., excinuclease ABC subunit UvrA from Dickeya dianthicola ME23

 Score = 1540 bits (3987), Expect = 0.0
 Identities = 751/940 (79%), Positives = 839/940 (89%), Gaps = 1/940 (0%)

Query: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIE+RGARTHNLKNINL IPRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEIRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC 120
           ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITE++DYLRLL+ARVGEPRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120

Query: 121 PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID 180
           PEH +PL AQT+SQMVD VL  PEG ++MLLA IVKERKGEH KTLENLA QG+IRARID
Sbjct: 121 PEHAIPLDAQTVSQMVDNVLSQPEGKRLMLLAPIVKERKGEHTKTLENLATQGYIRARID 180

Query: 181 GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEG- 239
           GE CDL+DPPKLEL KKHTI+V+VDRFKVR+DL QRLAESFETALELSGG  VVA M+  
Sbjct: 181 GEVCDLSDPPKLELQKKHTIDVVVDRFKVRNDLAQRLAESFETALELSGGTAVVADMDDP 240

Query: 240 DGEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANL 299
           +  E +FSANFACP CGYSM ELEPRLFSFNNPAGACPTCDGLGVQQ+FDP RV+Q+  L
Sbjct: 241 NAPELLFSANFACPVCGYSMHELEPRLFSFNNPAGACPTCDGLGVQQFFDPARVVQNGEL 300

Query: 300 SLAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKY 359
           SLA GAIRGWD++NFYYFQML +LAEHY FDV  PF+ LS  +Q++IL+GSG+  IEFKY
Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLRSLAEHYQFDVEAPFDNLSPAVQKVILYGSGKENIEFKY 360

Query: 360 INDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARN 419
           INDRGD  +++HPFEG+L+N+ERRY++TES +VREELAK+ISN+PC+SC+GTRL+ EAR+
Sbjct: 361 INDRGDTSVRRHPFEGVLNNMERRYKETESTAVREELAKFISNRPCASCNGTRLREEARH 420

Query: 420 VFINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNL 479
           V++  T LP I ++SI  A+ FF  +KL GQRA+IAEKV+KEI DRL+FLVNVGLNYL+L
Sbjct: 421 VYVEQTTLPQIADMSIGHAMAFFHNIKLSGQRAKIAEKVLKEIGDRLRFLVNVGLNYLSL 480

Query: 480 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNT 539
           SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL+TL HLRNLGNT
Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT 540

Query: 540 VLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAV 599
           V+VVEHDEDAIR ADH+IDIGPGAGVHGG V+AEG   +I+A P SLTGQ+LSG +KI +
Sbjct: 541 VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAEGTAAQIMAEPESLTGQFLSGARKIEI 600

Query: 600 PEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHT 659
           P QR P D  K ++L GA GNNLK+V L++PVGLFTC+TGVSGSGKSTLINDT F IA  
Sbjct: 601 PTQRIPADPGKVLKLIGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660

Query: 660 ALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE 719
            LNG     PA YR IQGLEHFDKVIDIDQSPIGRTPRSNPATYTG+FTPIRELFAG  E
Sbjct: 661 QLNGGELNEPAAYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAGVPE 720

Query: 720 SRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRY 779
           +RSRGY PGRFSFNVRGGRCEACQGDGVIKVEMHFLPD+YVPCD CK KRYNRETLE++Y
Sbjct: 721 ARSRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKSKRYNRETLEIKY 780

Query: 780 KGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL 839
           KGK+I EVL+MT+E+AREFFD +P +ARKLQTL+DVGLSYIRLGQSATTLSGGEAQRVKL
Sbjct: 781 KGKSIHEVLEMTIEEAREFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKL 840

Query: 840 ARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADW 899
           ARELSKR TG+TLYILDEPTTGLHF DIQQLL+VLH+LRD GNT+VVIEHNLDVIKTADW
Sbjct: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLTVLHQLRDQGNTIVVIEHNLDVIKTADW 900

Query: 900 IIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
           I+DLGPEGG GGG I+  GTPE VAQ E SHTARFLKP+L
Sbjct: 901 IVDLGPEGGSGGGEILVSGTPETVAQCEKSHTARFLKPIL 940