Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 981 a.a., excinuclease ABC subunit UvrA from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 1113 bits (2878), Expect = 0.0
 Identities = 573/946 (60%), Positives = 723/946 (76%), Gaps = 11/946 (1%)

Query: 4   IEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63
           I VRGAR HNLK ++L IPR++L+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 8   IRVRGAREHNLKGVDLDIPREQLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 67

Query: 64  FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEH 123
           FL LM KPDVD IEGLSPAISIEQK+TS NPRSTVGT+TE++DY+RLL+ARVG P  P  
Sbjct: 68  FLELMGKPDVDLIEGLSPAISIEQKTTSKNPRSTVGTVTEIHDYMRLLWARVGVPYSPAT 127

Query: 124 QVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARIDGET 183
            +P+++QT+SQMVDK++ LP+G +++LLA +V+ RKGE+ K +     QGF R +IDG+ 
Sbjct: 128 GLPIESQTVSQMVDKLVALPDGERILLLAPVVRGRKGEYKKEIAEWQRQGFQRLKIDGQF 187

Query: 184 CDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVV---APMEGD 240
             + + P L+   KH I+++VDR   + D + R A+S +TAL L+ GI      +  EG+
Sbjct: 188 YPIDEAPTLDKKFKHDIDIVVDRIVTKPDQEARYADSLQTALGLADGIANAEWASTAEGE 247

Query: 241 GEEQ--IFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDAN 298
              +  +FS  FACP  G+++ E+EPRLFSFNNP GACP CDGLGV+  FD D VI D +
Sbjct: 248 TAPRSILFSERFACPVSGFTISEIEPRLFSFNNPFGACPVCDGLGVKLAFDADLVIPDRD 307

Query: 299 LSLAQGAIRGWDQ-KNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEF 357
            +L +GA+  W +  +  Y Q L +L+ HY F +  P+  L  +  + ILHG+G  +I+F
Sbjct: 308 KTLHKGAVAPWARGPSPLYTQTLQSLSLHYGFSMDKPWRDLPAQAHKAILHGTGSEKIKF 367

Query: 358 KYINDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEA 417
            Y ++     + K PFEG+L NLERR+R+T+S  VREELA+Y S  PC +C G RLK EA
Sbjct: 368 VYDDNARKYEVSK-PFEGVLPNLERRWRETDSAWVREELARYQSETPCDACHGKRLKPEA 426

Query: 418 RNVFINDTALPTIVELSIADALTFFQELK--LEGQRAQIAEKVMKEINDRLQFLVNVGLN 475
             V +    +  I  LSI+ A  +F  L+  L  ++ +IA +++KEI DRL+FL NVGL+
Sbjct: 427 LAVKVGGEDIADISTLSISKAYLWFSTLEENLTEKQMEIARRILKEICDRLRFLNNVGLD 486

Query: 476 YLNLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRN 535
           YLNLSRS+ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN RLL++L  LR+
Sbjct: 487 YLNLSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNTRLLESLKGLRD 546

Query: 536 LGNTVLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVK 595
           LGN+VLVVEHDE+AI  AD+VID+GP AGVHGG V AEG   +++ANP SLTG+YL+G +
Sbjct: 547 LGNSVLVVEHDEEAILTADYVIDMGPAAGVHGGQVCAEGTPAQVMANPKSLTGKYLTGER 606

Query: 596 KIAVP-EQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFF 654
           +I +P E R P + K+ +++ GA GNNLK+V   IPVG+FTC+TGVSG GKST   +T +
Sbjct: 607 EIEIPAEGRRPINRKRMLKISGASGNNLKSVTGEIPVGVFTCITGVSGGGKSTFTIETLY 666

Query: 655 KIAHTALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELF 714
           K A   LN A+ A PAP+  I+GLEHFDKVIDIDQSPIGRTPRSNPATYTG F PIR+ +
Sbjct: 667 KAAARRLNNASEA-PAPFDRIEGLEHFDKVIDIDQSPIGRTPRSNPATYTGAFGPIRDWY 725

Query: 715 AGTQESRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRET 774
           AG  ES++RGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPDVYV CDVCKGKRYNRET
Sbjct: 726 AGLPESKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYNRET 785

Query: 775 LEVRYKGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEA 834
           LE+ +KGK+I +VLDMTVE+A  FF  VP I  K+ TL  VGL Y+++GQ ATTLSGGEA
Sbjct: 786 LEIVFKGKSISDVLDMTVEEAASFFKAVPPIRDKMLTLERVGLGYVKVGQPATTLSGGEA 845

Query: 835 QRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVI 894
           QRVKL++ELSKR TG+TLYILDEPTTGLHF D ++LL VL  L + GNT+VVIEHNLDVI
Sbjct: 846 QRVKLSKELSKRATGRTLYILDEPTTGLHFEDTRKLLEVLQELVEAGNTIVVIEHNLDVI 905

Query: 895 KTADWIIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN 940
           K AD+++D GPEGG GGG I+A GTPE VA  +AS T ++LK +L+
Sbjct: 906 KVADYLLDFGPEGGDGGGEIVAVGTPEQVADNKASWTGKYLKEVLD 951