Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 955 a.a., UvrABC system protein A from Azospirillum sp. SherDot2

 Score = 1146 bits (2964), Expect = 0.0
 Identities = 585/939 (62%), Positives = 724/939 (77%), Gaps = 6/939 (0%)

Query: 4   IEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63
           I VRGAR HNLKN+++ +PRD+LIVITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 5   ISVRGAREHNLKNVDVDLPRDELIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 64

Query: 64  FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEH 123
           FL LM+KPDVD IEGLSPAISIEQK+TS NPRSTVGT+TE+YDY+RLL+ARVG P  P  
Sbjct: 65  FLELMQKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGIPYSPAT 124

Query: 124 QVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARIDGET 183
            +P+++QT+SQMVD++L +PEG++++LLA  V+ RKGE+ K +++L  +GF R R+DG  
Sbjct: 125 GLPIESQTVSQMVDRILGMPEGTRLLLLAPFVRGRKGEYKKEIQDLRKRGFQRVRVDGTM 184

Query: 184 CDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGDGEE 243
            ++ + P L    KH IEV+VDR  VR  L  RLA+S ETAL L+ GIV V   E + E+
Sbjct: 185 YEIDEVPALNKKLKHDIEVVVDRIVVREGLGNRLADSLETALGLADGIVWVENAETN-EQ 243

Query: 244 QIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANLSLAQ 303
            +FS  FACP  G+++ E+EPRLFSFNNP GACP CDGLG + YFDP  V+ D  L+LA+
Sbjct: 244 TVFSQKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGSKIYFDPMLVVPDERLTLAK 303

Query: 304 GAIRGW-DQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKYIND 362
           GAI  W    + YY Q L ++ EH+D  + TP+  L + +++ IL GS  + I   Y + 
Sbjct: 304 GAIAPWAGSTSKYYDQTLESICEHFDASMTTPWQDLPETVRKTILFGSDGSAITMTYDDG 363

Query: 363 RGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARNVFI 422
               +  K  FEGI++NLERR+R+T+S   R+EL+KY S++PC  C G RLK EA  V I
Sbjct: 364 LRRYQTNK-AFEGIVNNLERRFRETDSAWTRDELSKYQSSQPCEVCKGARLKPEALAVKI 422

Query: 423 NDTALPTIVELSIADALTFFQELK--LEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS 480
               +    ELSIA A  +F EL   L  +  +IA +++KEIN+RL FL  VGL YL LS
Sbjct: 423 RGRNISEAAELSIAGAGAWFSELNEHLRPKDREIAYRILKEINERLGFLNAVGLEYLTLS 482

Query: 481 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNTV 540
           R + TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN+RLL+TL  LR++GNTV
Sbjct: 483 RGSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLETLKRLRDIGNTV 542

Query: 541 LVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAVP 600
           +VVEHDEDAIR AD+++D+GPGAG HGG V+A+G  EE+  NP+S+T QYL+G + + VP
Sbjct: 543 VVVEHDEDAIRSADYLVDMGPGAGQHGGSVIAQGTPEEVQKNPDSITAQYLNGTRFVPVP 602

Query: 601 EQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHTA 660
           + R P    + +E++GA  NNL+NV   IP+G FTCVTGVSG GKSTLI +T +K     
Sbjct: 603 DTRRPGHPGQFLEVQGARANNLQNVSTRIPLGTFTCVTGVSGGGKSTLIIETLYKAVARK 662

Query: 661 LNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES 720
           L GA    PA + ++ GLEH DKVIDIDQSPIGRTPRSNPATYTG FTP+R+ FAG  E+
Sbjct: 663 LMGAREH-PAEHDAVLGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPMRDWFAGLPEA 721

Query: 721 RSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYK 780
           ++RGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPDVYV CDVC GKRYNRETLEV Y+
Sbjct: 722 KARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCHGKRYNRETLEVTYR 781

Query: 781 GKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLA 840
            KTI +VLDMTVE+ +EFF  VP I  KL TL  VGL YI +GQ+ATTLSGGEAQRVKL+
Sbjct: 782 DKTIADVLDMTVEEGKEFFKAVPGIRDKLDTLERVGLGYIHIGQAATTLSGGEAQRVKLS 841

Query: 841 RELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADWI 900
           +ELS+R TG+TLYILDEPTTGLHF D+++L+ VLH L D GNTV+VIEHNL+VIKTADWI
Sbjct: 842 KELSRRATGRTLYILDEPTTGLHFADVEKLMEVLHALVDQGNTVLVIEHNLEVIKTADWI 901

Query: 901 IDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
           IDLGPEGG GGG I+AEGTPEDVA++E S+T R+L P L
Sbjct: 902 IDLGPEGGTGGGEIVAEGTPEDVAKVERSYTGRYLAPYL 940



 Score = 57.0 bits (136), Expect = 6e-12
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 6/112 (5%)

Query: 610 KTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHTALNGATTATP 669
           K + ++GA  +NLKNVD+ +P      +TG+SGSGKS+L  DT +         + +A  
Sbjct: 3   KYISVRGAREHNLKNVDVDLPRDELIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 62

Query: 670 APY------RSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFA 715
             +        +  +E     I I+Q    + PRS   T T I+  +R L+A
Sbjct: 63  RQFLELMQKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWA 114