Pairwise Alignments

Query, 940 a.a., UvrABC system protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 943 a.a., Excinuclease ABC subunit A from Alteromonas macleodii MIT1002

 Score = 1532 bits (3967), Expect = 0.0
 Identities = 748/940 (79%), Positives = 848/940 (90%), Gaps = 1/940 (0%)

Query: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIE+RGARTHNLKNI+LT+PRDKL+VITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEIRGARTHNLKNIDLTLPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC 120
           ARQFLS+MEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITE+YDYLRL++ARVG PRC
Sbjct: 61  ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGTPRC 120

Query: 121 PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID 180
           P+H VPL AQT+SQMVDKVL +PEGSK+MLLA IVKERKGEHVKTL+NL+AQGFIRARID
Sbjct: 121 PDHDVPLDAQTVSQMVDKVLAMPEGSKLMLLAPIVKERKGEHVKTLQNLSAQGFIRARID 180

Query: 181 GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEG- 239
           GE CDL+DPP L+LHKKHTIEV+VDRFKVR D+  RLAESFETAL L+GG  VVA M+  
Sbjct: 181 GEVCDLSDPPPLDLHKKHTIEVVVDRFKVRDDMALRLAESFETALSLAGGNAVVADMDDK 240

Query: 240 DGEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANL 299
           D EE +FSANFACPHCGYS+ ELEPRLFSFNNPAGACPTCDGLG +Q+FDP RV+ +  L
Sbjct: 241 DAEEIVFSANFACPHCGYSISELEPRLFSFNNPAGACPTCDGLGTRQFFDPARVVGNTEL 300

Query: 300 SLAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKY 359
           SL+ GAIRGWD++++YYFQML A+A+HY F +  PF +L KK Q+I+L+GS    + FKY
Sbjct: 301 SLSGGAIRGWDKRSYYYFQMLQAVADHYKFSLTAPFEELDKKHQDIVLYGSKGKSLSFKY 360

Query: 360 INDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARN 419
           IN+RGD+  +KHPFEGI+ N+ERRYR+TESNSVREELAKY+S + CSSC+GTRL++EARN
Sbjct: 361 INERGDVMERKHPFEGIIPNMERRYRETESNSVREELAKYLSQQHCSSCNGTRLRVEARN 420

Query: 420 VFINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNL 479
           VFI DT LP I ++SIADA  FF+ L LEGQRAQIAEK++KEI DRL+FLVNVGLNYL++
Sbjct: 421 VFIQDTNLPAIADMSIADAYGFFETLNLEGQRAQIAEKILKEIMDRLRFLVNVGLNYLSM 480

Query: 480 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNT 539
           SRSA+TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TLTHLR+LGNT
Sbjct: 481 SRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTHLRDLGNT 540

Query: 540 VLVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAV 599
           VLVVEHDEDAIR AD+++DIGPGAGVHGG ++AEG++E+I  + +SLTG+YLSG +KI +
Sbjct: 541 VLVVEHDEDAIREADYIVDIGPGAGVHGGEIIAEGSLEDIKNSEHSLTGKYLSGREKIDI 600

Query: 600 PEQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHT 659
           P  RTP    K +EL GA GNNLK+VDL IP G+ TCVTGVSGSGKSTLINDTF+KIA  
Sbjct: 601 PATRTPVKDDKWLELLGATGNNLKSVDLRIPTGVMTCVTGVSGSGKSTLINDTFYKIAQR 660

Query: 660 ALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE 719
            LN ATT+ PAP++S+ GL+  DKV+DIDQSPIGRTPRSNPATY GIFTPIRE+FAGTQE
Sbjct: 661 ELNKATTSEPAPHKSMTGLDQLDKVVDIDQSPIGRTPRSNPATYAGIFTPIREMFAGTQE 720

Query: 720 SRSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRY 779
           SRSRGY+PGRFSFNV+GGRCEACQGDGVIKVEMHFLPDVYVPCDVC+GKRYNRETLE++Y
Sbjct: 721 SRSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCQGKRYNRETLEIKY 780

Query: 780 KGKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL 839
           K K I EVL+MTVEDAR+FFD +P I+RKLQTLMDVGLSYIRLGQ+ATTLSGGEAQRVKL
Sbjct: 781 KDKNIHEVLEMTVEDARQFFDAIPAISRKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKL 840

Query: 840 ARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADW 899
           A+ELSKRDTG+TLYILDEPTTGLHFHDI+QLL+VLHRLRDHGNTVVVIEHNLDVIKTADW
Sbjct: 841 AKELSKRDTGQTLYILDEPTTGLHFHDIKQLLAVLHRLRDHGNTVVVIEHNLDVIKTADW 900

Query: 900 IIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLL 939
           I+DLGPEGG GGG IIAEGTPE VAQ E SHT RFLKP+L
Sbjct: 901 IVDLGPEGGSGGGQIIAEGTPEHVAQQEVSHTGRFLKPML 940