Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1251 a.a., Methionine synthase from Xanthobacter sp. DMC5

 Score = 1506 bits (3898), Expect = 0.0
 Identities = 754/1224 (61%), Positives = 937/1224 (76%), Gaps = 9/1224 (0%)

Query: 9    LEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEI 68
            L +   +RIL++DG MGTMIQ  KL E  YRG RF DW  D+KGNNDLL LTQP  ++ I
Sbjct: 20   LAKAAAERILVLDGAMGTMIQQLKLDEAGYRGERFKDWPRDVKGNNDLLSLTQPDAVRAI 79

Query: 69   HSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSRPR 128
            H  Y  AGAD++ETNTF+ T+IA ADY M+ +  E+NF +AKLARE AD    K+  R R
Sbjct: 80   HLEYFRAGADMVETNTFSGTSIAQADYGMEEIVYELNFESAKLAREAADI-AQKEDGRRR 138

Query: 129  YVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTL 188
            +VAG  GPTNRT SISPDVNDPGFR VTFD L +AY E  R L+ GG+D++L+ETIFDTL
Sbjct: 139  FVAGAFGPTNRTASISPDVNDPGFRAVTFDELADAYFEQARGLVDGGADILLVETIFDTL 198

Query: 189  NAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGLNC 248
            NAKA  FA++ ++ E G  LPVMISGTITD SGRTLSGQT  AF+ +LRH +P S GLNC
Sbjct: 199  NAKAAIFAIEKLYAERGFRLPVMISGTITDLSGRTLSGQTPSAFWYSLRHAKPFSIGLNC 258

Query: 249  ALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQAGFLNLV 308
            ALG  E+R ++ E+ R+++  V A+PNAGLPN FG YD S E MA  + E+A +G +N+V
Sbjct: 259  ALGAREMRAHIAEIGRVADTLVCAYPNAGLPNEFGMYDESPEAMAALVGEFAASGLVNVV 318

Query: 309  GGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGERTNVTG 368
            GGCCGTTP HI AIA+ V+G  PR +P+L+   RLSGLEP  + P+  FVNVGERTNVTG
Sbjct: 319  GGCCGTTPAHIRAIAEVVKGKAPREVPELEPRLRLSGLEPFELTPQIPFVNVGERTNVTG 378

Query: 369  SARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEPEIS 428
            SARF++LI    +  AL VAR+QVENGAQ+IDINMDEG+LD+EA M+ FLNL A+EP+I+
Sbjct: 379  SARFRKLITTGDFPAALAVARDQVENGAQVIDINMDEGLLDSEAAMITFLNLVAAEPDIA 438

Query: 429  KVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMAFDE 488
            KVPVMVDSSKWE+IE GLK +QGKGIVNSISLKEG+E F+ +A+LVR YGAAV+VMAFDE
Sbjct: 439  KVPVMVDSSKWEIIEQGLKRLQGKGIVNSISLKEGEEAFLEKARLVRAYGAAVVVMAFDE 498

Query: 489  VGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFINAVA 548
             GQAD+  RK  IC RAY IL +EVGFPPEDIIFDPN+FAVATGI+EH+ Y + FI A  
Sbjct: 499  EGQADSYARKTSICERAYRILTEEVGFPPEDIIFDPNVFAVATGIEEHSGYGVAFIEATR 558

Query: 549  DIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQLEIYDN 608
             I++ LP+A +SGGVSN+SFSFRGN  VREA+HAVFLYH  K GMDMGIVNAGQL +YD 
Sbjct: 559  FIRQSLPYAHVSGGVSNLSFSFRGNEPVREAMHAVFLYHAIKAGMDMGIVNAGQLAVYDE 618

Query: 609  VPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPVAKRLEHAL 668
            +  KLREA EDV+LNRR+D TERLLEIAE ++  + GKE+  + L WR WPV KRLEHAL
Sbjct: 619  IEPKLREACEDVVLNRRADATERLLEIAEGFK-GAAGKEKKEADLAWRTWPVEKRLEHAL 677

Query: 669  VKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQ 728
            V GIT+F+  DTEEARQ+ ++PL VIEGPLM GMNVVGDLFG GKMFLPQVVKSARVMKQ
Sbjct: 678  VNGITDFVEADTEEARQKVARPLHVIEGPLMAGMNVVGDLFGAGKMFLPQVVKSARVMKQ 737

Query: 729  AVAYLEPFINAQK-----SGSTSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIIDLGV 783
            AVAYL PF+  +K     + +++ GK+L+ATVKGDVHDIGKNIVGVVLQCNN+E+IDLGV
Sbjct: 738  AVAYLMPFMEKEKEEQGITSASAAGKVLMATVKGDVHDIGKNIVGVVLQCNNYEVIDLGV 797

Query: 784  MVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSKAHT 843
            MVP ++IL+VA+++ VD+IGLSGLITPSLDEMV+VA EMER+GF +PLLIGGATTS+ HT
Sbjct: 798  MVPTQKILQVAKDEKVDVIGLSGLITPSLDEMVNVASEMEREGFVVPLLIGGATTSRVHT 857

Query: 844  AVKIEQNY-HAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQHARKTPKS 902
            AVKI   Y     VYV +ASRAVGV ++LL+ E R  ++  +  +Y +  + HAR     
Sbjct: 858  AVKIAPRYERGQAVYVTDASRAVGVVSNLLNAETRGTYVADVRAEYAKLAEAHARADANK 917

Query: 903  RPVTLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMTWSLMGKY 962
            + +TL +AR N   LD++ +TP  P+  G HVFE+  LA L P+IDWTPFF +W L G+Y
Sbjct: 918  QRLTLAKARENALKLDFSAHTPEKPSFLGTHVFEDHDLADLVPFIDWTPFFQSWELTGRY 977

Query: 963  PAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVGDDIEVYSDESRT 1022
            PAILE   VGE A+ LF DA A+L K+  E  + A  +   +PA +VGDDI ++ D++R 
Sbjct: 978  PAILEDAVVGEPARALFADAQAMLKKMVSEKWVTARAVVGFWPANAVGDDILLFRDDTRK 1037

Query: 1023 QVAHVLYNLRQQTEKPKGA-NYCLSDYVAPKESGKRDWIGAFAVTGGIGERALADAYKAQ 1081
                 L+ LRQQ  + +G  N  LSD++AP ESG  D++G FAVT GIGE     A+KA 
Sbjct: 1038 TPLATLHTLRQQLARREGRFNLALSDFIAPLESGVADYVGGFAVTAGIGEEDRVAAFKAA 1097

Query: 1082 GDDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQGIRPAPGY 1141
             DDY+AI+++A+ DRLAEA AE +H  VR ++WGYA+DE L+NDDLI ERY+GIRPAPGY
Sbjct: 1098 NDDYSAILLKALCDRLAEALAERMHHIVRTKLWGYATDEALANDDLIAERYRGIRPAPGY 1157

Query: 1142 PACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAVAQIQPDQ 1201
            PA P+HTEKATL+++L+  +  G+ LT S+AMWPGA+VSG+YF+HP+S YF V +I+ DQ
Sbjct: 1158 PAQPDHTEKATLFELLDATQKAGIHLTESFAMWPGAAVSGFYFAHPESAYFGVGRIERDQ 1217

Query: 1202 LHSYAERKGWRLEEAEKWLAPNLD 1225
            +  YA RKGW L EAE+WLAP L+
Sbjct: 1218 VEDYARRKGWTLAEAERWLAPILN 1241